| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0312 |
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| Symbol | |
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| ID | 3915554 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | - |
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| Start bp | 337044 |
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| End bp | 338354 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640443041 |
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| Product | conjugal transfer protein TrbL |
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| Protein accession | YP_495594 |
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| Protein GI | 87198337 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3846] Type IV secretory pathway, TrbL components |
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| TIGRFAM ID | [TIGR02783] P-type conjugative transfer protein TrbL |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGTGGCA CCGGCGTCGT CGACCGCTTC CTCGACATCT TCTCACGCTA CATCGATTCC
GGGTTCGGCC TGCTGTCGGG CGAGGTCGCT TTCATCGCGA CCACGCTGAT CGTCATCGAT
GTGACGCTTG CCGCCCTGTT TTGGACCTGG GGCGAACAGG ACGACGTCAT CGCCCGCCTG
GTCAAGAAGA CCCTGTTTGT GGGGATCTTC GCCTACATCA TCGGCAACTG GAACAACCTC
GCCCGGATTG TCTTCGAGAG CTTTGCCGGG CTCGGCCTCA AGGCCAGCGG CACCGGCTTT
TCGGCAGGCG AGTTGCTCCA GCCCGGCCGT GTCGCCCAGG TCGGGCTCGA TGCCGCACGG
CCCCTGATCG AGGCGATCTC GGACCTCATG GGCTTCGTCA GCTTCTTCGA GAACTTCCTG
CAGATCGTCA TCTTGCTCGT CGCCTGGGCG CTGGTCGTGA TCGCCTTCTT CATTCTCTCG
ATCCAGCTGT TCGTCACCCT GATCGAGTTC AAGCTGACCA CGCTCGCGGG CTTCGTCCTC
ATTCCCTTCG GCCTGTTCGG CAAGACCGCC TTCATGGCCG AGCGCGTGCT CGGCAACGTG
GTCTCGAGCG GGATCAAGGT GCTCGTGCTG GCGGTCATCG TCGGCATCGG CTCGACCATC
TTTTCGGAAT TCACCAGCGC CATTCCGGCC GAGCCAACCA TCGAGGATGC ACTCTCGATC
GTGCTGGCGA GCCTGACCCT GCTCGGGCTC GGCATTTTCG GACCCGGCAT TGCCAACGGC
ATTGTCGCCG GAGGCCCGCA GCTGGGGGCT GGTGCCGCCG CAGGAACCGC ACTCATGGCG
GGTGGGGCCG CTGCTGGCGC GGTTGCCGGA GCAAAGCTTG CCGGCGGCGC AGTAGCCAGC
GCCGCCTCCA GCGTTGCCCA CGGCACCTCT CGTGCCGCCG GCGGCGCCAC GACTGCCTAT
GCTATGGGTT CTGCCGGGAA GAGCGGCGCT GCCGCTATCG GTTCTGGCGC GGCGGCTGTC
GGAGACGCGG CGCTGGGCGC CACCGTCTCG CCGCTGCGCA AGGCCGGCGA AGGCCTCCAG
CAATCGTTCC GTGAGGGCGG GCGGTCCGCG ATCACCAACA CCGGCGGCAC CATCACGCCG
GGTCCCGACA CCCCGGCTCC GCCCACTGCC GAGGCCGGTC AGCCGGCCTG GGCCCGGACG
ATGAAGAACC GGCAGACCCT CGCGCAAGGC GCCACCATCG CCGCCCACAC GCTCAAGGCT
GGCGACAGCA GCGGTGCGGG CGCTTCCATC GACACATCGG AAAAGGACTG A
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| Protein sequence | MGGTGVVDRF LDIFSRYIDS GFGLLSGEVA FIATTLIVID VTLAALFWTW GEQDDVIARL
VKKTLFVGIF AYIIGNWNNL ARIVFESFAG LGLKASGTGF SAGELLQPGR VAQVGLDAAR
PLIEAISDLM GFVSFFENFL QIVILLVAWA LVVIAFFILS IQLFVTLIEF KLTTLAGFVL
IPFGLFGKTA FMAERVLGNV VSSGIKVLVL AVIVGIGSTI FSEFTSAIPA EPTIEDALSI
VLASLTLLGL GIFGPGIANG IVAGGPQLGA GAAAGTALMA GGAAAGAVAG AKLAGGAVAS
AASSVAHGTS RAAGGATTAY AMGSAGKSGA AAIGSGAAAV GDAALGATVS PLRKAGEGLQ
QSFREGGRSA ITNTGGTITP GPDTPAPPTA EAGQPAWART MKNRQTLAQG ATIAAHTLKA
GDSSGAGASI DTSEKD
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