| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Saro_0244 |
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| Symbol | |
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| ID | 3917595 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Novosphingobium aromaticivorans DSM 12444 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007794 |
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| Strand | + |
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| Start bp | 251857 |
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| End bp | 253635 |
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| Gene Length | 1779 bp |
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| Protein Length | 592 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640442971 |
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| Product | Type I secretion system ATPase, PrtD |
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| Protein accession | YP_495526 |
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| Protein GI | 87198269 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGCGGG ACTATCTTAA GTTGTTCGTT GCGCGATATC GTTCGTCGCT AGTGCTGGTG
ATTGCCGCCA GCGTCCTGCT CAACCTTCTC GTTTTCGCCG GCACGATATA CATGATGCTG
GTCTATGACT CGGTACTGCC GAGCCGCAGC ATCCCGACCC TTGTCGGCCT GTTCGCGATG
ATCGTGCTGG TCTACCTGTT CCAGGCCCTG TTCGAGGCCA TTCGCGGCGA GGCGATGCTC
TCGGTCGCCA ATGGCGTGCA TGACGATCTC TTTGCTGCCG TCCACCACGC CACGGTTTCG
CGCCCCCTGC GCGCCGCCGC CGACAAGGGC GACGGTCTTC AGCCGATCCG CGATCTCGAT
GCGATCCACA CGTTCCTTGC GGGGCCGGGG CCGACGGCGC TGATCGACCT GCCGTGGGTA
ATCGTGTTCC TCTTCGTGCT GACTGCGTTG CACTGGTGGC TGGGGCTGAC GGCGCTGGTC
GGGGTGATCG TGCTGTCCGC GATCGCGTTG TGGTCCAACC GGCGGACGGC GAGTGCGACC
CGGCAATTGC AGTCGGTCAT CGGCCAGCGG TCCGCCTCGG CCCAGGCCGA GATCCGCAAT
GCCGAGACGG CCGTCGCCAT GGGCATGCAG GAGCGCCTGC TGACCCGGAC GCGTGGCTGG
GAAGCGGATT TTCTCGAATC GCAATCGCGC CTGTCGCGGC TTGTCTCGCG GTTCGGCGGG
GCGGGGCGCA CGTTCCGCGT CTTCCTGCAA TCGCTGATCC TGACCGTGGG CGCGCTGCTG
GTGATCGACG ACAAGGCCAG CGGCGGCGTG ATTCTCGCGT CCTCGGTGTT GTCCGGACGC
GCGCTGGCGC CGGTCGATTC GGCAATCGCC AACTGGCGCG GCCTGGTCGC GGCAAGCACC
GGCTGGGAGC GGATCGTCCA GCTCATCAAT GCCTTCCAGA AGGCACCGCC CCGCTCGATC
GAGCTTGGCG CGCCCAGCGC CGAACTCTCG ATCCGCGACC TGTGGGTGGC CCCGCCGGGC
GTCCAGCGCA TGACCGTGCA GGGCGCGGCC CTTTCGCTCA CCCCCGGCCA GGCGCTTGCG
ATCATCGGGC CTAGCGCGGC CGGCAAGACC TCGCTGATGA AGGCCATGCT CGGCATCTGG
CGCCCGCAGC GGGGCGAAGT CCGCCTCGAT GGCGCGACGC TCGACCAGTG GGCTGCCGAA
AGCCTGGGCC GCCACATCGG CTACGTGCCG CAGACCGTGG AACTCGTCGA CGGCACCATC
GGCGAGAACA TCGCGCGCTT CGATCCCGAT GCCACGTCGG ACGGCGTGAT CGCGGCCGCG
CGCGCGGCGG GAATGCACGA GACGATCCTG GCCATGCCCG ACGGCTATGA CACGCGGCTG
ACGGGGGGCG GGCTGGAACT CTCCGCCGGC CAGCGCCAGC GCGTGGGCCT TGCCAGGGCG
CTTTACGGCG AACCGTTCCT TGTCGCGCTG GACGAGGCCA ATTCCAATCT CGACTCGGCG
GGCGACGCAG CCCTGGCCAA GGCGGTCGAG GACGTCCGCA AGCGCGGCGG CATAGTTGTC
ATGATTACCC ACCGCCCCGC TACGCTCGGG CCGATCAGCC ATGTCGCGGT CATGGCGGGT
GGCCGCATCA TCGACCTTGG CGAGCGCGAC GAGGTGATGA AGCGGCTCAG CACCGCCAAC
CCCGGCGAGC CGAAGGACGG CCAGACCGTT GCCGCCCGGA CAGGCCCGGC CAAGGTCGGT
GCCAGCAAGA CCGGTTCCGA AGGGGAGGTT GCGCAATGA
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| Protein sequence | MGRDYLKLFV ARYRSSLVLV IAASVLLNLL VFAGTIYMML VYDSVLPSRS IPTLVGLFAM
IVLVYLFQAL FEAIRGEAML SVANGVHDDL FAAVHHATVS RPLRAAADKG DGLQPIRDLD
AIHTFLAGPG PTALIDLPWV IVFLFVLTAL HWWLGLTALV GVIVLSAIAL WSNRRTASAT
RQLQSVIGQR SASAQAEIRN AETAVAMGMQ ERLLTRTRGW EADFLESQSR LSRLVSRFGG
AGRTFRVFLQ SLILTVGALL VIDDKASGGV ILASSVLSGR ALAPVDSAIA NWRGLVAAST
GWERIVQLIN AFQKAPPRSI ELGAPSAELS IRDLWVAPPG VQRMTVQGAA LSLTPGQALA
IIGPSAAGKT SLMKAMLGIW RPQRGEVRLD GATLDQWAAE SLGRHIGYVP QTVELVDGTI
GENIARFDPD ATSDGVIAAA RAAGMHETIL AMPDGYDTRL TGGGLELSAG QRQRVGLARA
LYGEPFLVAL DEANSNLDSA GDAALAKAVE DVRKRGGIVV MITHRPATLG PISHVAVMAG
GRIIDLGERD EVMKRLSTAN PGEPKDGQTV AARTGPAKVG ASKTGSEGEV AQ
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