Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Saro_0144 |
Symbol | |
ID | 3918118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Novosphingobium aromaticivorans DSM 12444 |
Kingdom | Bacteria |
Replicon accession | NC_007794 |
Strand | + |
Start bp | 146028 |
End bp | 146723 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640442869 |
Product | glycoside hydrolase family protein |
Protein accession | YP_495427 |
Protein GI | 87198170 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3757] Lyzozyme M1 (1,4-beta-N-acetylmuramidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAAGA AACGGAACAC GGTGCGTAGG CGCCTGCTCG CGGCGTTGCT GCTGGTCGTG CTCGTGGGCG CGGGCGCCGG CTGGTGGACG TCGCGCACCT GGATGCCGGA CCGGACGCGC TATCCGGTCC AGGGCGTCTG GCTGAGCGAC GATGATGGTA GCGTCGACTG GCGGTTTCTG CGCGCCGCAG GCGCGGATTT CGCCTACCTG ACCGCCAGCG AAGGTGCCGG GACGCGGGAC AGTGTCTATG CCGCAGGCGT CGAAGCAGCC CGGTTGCGCG GACTGCAGGT AGGGCCGGTC CATGTCTACG ACCTGTGTGC CCCGGCCGAC GCGCAGGCCG CGAACTTCGT GACCGTGGTG CCACGCGATC CGGAGTTGCT CCCACCGGCG ATTGCGCTCG ACATCGATTC GCGCACCTGC CCTGAACCTC CCGGCGAGGC GCAGATGCAG AGCGAGTTGA CCACGTTCCT CAACCAGGTG GAGAAGCATG CAGAGAAGCC AGCGATCCTG ATGGTGTCGC GCGGTCTGGA AAAGCAGTAT CATCTTGCCG CCATGATCGA CCGCAATCTC TGGGTTTCGC AGGACTTCAT CGAGCCCGGC TACGCCGGCA GGCCGTGGGT CATGTGGACA GCGACCAAGC GCCTGCGTCT GCATGGCGCA AGCGGCCCCC TGCGCTGGGT CGTCGTGCAG CCATGA
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Protein sequence | MAKKRNTVRR RLLAALLLVV LVGAGAGWWT SRTWMPDRTR YPVQGVWLSD DDGSVDWRFL RAAGADFAYL TASEGAGTRD SVYAAGVEAA RLRGLQVGPV HVYDLCAPAD AQAANFVTVV PRDPELLPPA IALDIDSRTC PEPPGEAQMQ SELTTFLNQV EKHAEKPAIL MVSRGLEKQY HLAAMIDRNL WVSQDFIEPG YAGRPWVMWT ATKRLRLHGA SGPLRWVVVQ P
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