Gene Saro_0004 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSaro_0004 
Symbol 
ID3916046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNovosphingobium aromaticivorans DSM 12444 
KingdomBacteria 
Replicon accessionNC_007794 
Strand
Start bp3158 
End bp3886 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content68% 
IMG OID640442729 
Productdihydrodipicolinate reductase 
Protein accessionYP_495287 
Protein GI87198030 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0289] Dihydrodipicolinate reductase 
TIGRFAM ID[TIGR00036] dihydrodipicolinate reductase 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAGAA TCGGAATCAT CGGCAGCGCG GGGCGCATGG GCAATGCATT GCAGGCGGCA 
GTGGCTGCGG CAGGGCACGA CTTTGCCGGC GGCATCGACA AGGGCGGAGA TCCGCTTGAA
CTGGCAAAGG CCAGCGACGT GCTGGTCGAC TTCTCCGCAC CCGGCGCGCT CGAGTTCAAT
CTCGACGCCG CAATCCATGC AGGCGTGCCG ATCGTGGTCG GAACGACGGG TCTCGAGGAA
CGCCATCACT GGCTGATCGA TGCAGCCGCA GTCAGCGTGC CCGTGCTGCA GACCGGCAAT
ACCTCGCTTG GCGTCACGCT GCTGGCCCAT CTCGTGCGCG AGGCCGCCGC GCGCCTTGGC
GAGGACTGGG ACATCGAGAT CGTCGAGACC CATCACCGCA TGAAGGTGGA TGCCCCGTCG
GGCACCGCGC TGCTGCTGGG CGAAGCGGCC GCAAAGGGGC GCGGCGTCAG CCTGGCCGAG
GAGGCCGTTC GCGGGCGCGA CGGCATCACC GGTGCGCGCA AGGCTGGCAC GATCGGCTTT
GCCGCCCTGC GCGGCGGATC GGTCGCGGGC GACCATTCGG TCCACTTCCT TGCCGACAAC
GAGCGTTTGA CCTTCTCGCA TCTTGCCGAG AACCGCGCGA TTTTCGCCAA GGGCGCGATC
CGGGCAGCGC AGTGGCTGCT CGATCAGGAG CCGGGTCGCT ACACGATGCC CGAAGTCCTC
GGCCTCTGA
 
Protein sequence
MARIGIIGSA GRMGNALQAA VAAAGHDFAG GIDKGGDPLE LAKASDVLVD FSAPGALEFN 
LDAAIHAGVP IVVGTTGLEE RHHWLIDAAA VSVPVLQTGN TSLGVTLLAH LVREAAARLG
EDWDIEIVET HHRMKVDAPS GTALLLGEAA AKGRGVSLAE EAVRGRDGIT GARKAGTIGF
AALRGGSVAG DHSVHFLADN ERLTFSHLAE NRAIFAKGAI RAAQWLLDQE PGRYTMPEVL
GL