Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4898 |
Symbol | |
ID | 5707414 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 5564549 |
End bp | 5565181 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641274293 |
Product | ABC transporter related |
Protein accession | YP_001539638 |
Protein GI | 159040385 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000896239 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGCGTGG CGGTCGACGT TCGGCAGGTA ACGGTCAGGT ACGGTTCGAC GCTGGTCCTG GACGGCATCG ACCTCCGGAT TCCCGAGGGC GCCGCCGTCG CGCTCGTCGG TGAGAACGGC TCCGGGAAGT CCACTCTGCT GCGCTGCGTC ACCGGCCTGC AGGAGCCCTC CGCCGGCGAC ATCTCCGTCT TCGGGACCGC GCCCGGGTGC GGTGCGACCT TCTGGCGGCA CGTCGCCACC ACAGTGGAGT CGCCGAGTTG GTATCAGGGC TTGACCGTAC GCGAGCATCT CGACCTGGTC CGGGTGGTCA ACGGCGGCGA CCCCGGCGAC GGACACATCG ACGAACTCTG CGTCACCCTT GGCCTGATCG GGCTCTGCGA CAGCCTGCCC AGCACATTGT CCTCCGGACA GCGTCAGCGC TTCCTGCTCG CCGCGACCCT CGTGCGGCCC AGCCGACTAC TCGTCCTCGA CGAACCTGAG CAGCGCCTCG ACGCCCGGAT CAAGGGTGCG ATCGCGGCGC ACCTGCGCAT GTACGTGCAG GCCGGCGGCA CGCTGGTGAT GGCCTGCCAC GACGACGGGT TCCGGGCCGG CGTCGGCGCG GGCGAGGTCG TGCTCACCCG CCCGGAGGTC TGA
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Protein sequence | MSVAVDVRQV TVRYGSTLVL DGIDLRIPEG AAVALVGENG SGKSTLLRCV TGLQEPSAGD ISVFGTAPGC GATFWRHVAT TVESPSWYQG LTVREHLDLV RVVNGGDPGD GHIDELCVTL GLIGLCDSLP STLSSGQRQR FLLAATLVRP SRLLVLDEPE QRLDARIKGA IAAHLRMYVQ AGGTLVMACH DDGFRAGVGA GEVVLTRPEV
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