Gene Sare_4864 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4864 
Symbol 
ID5707603 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5519126 
End bp5519815 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content68% 
IMG OID641274260 
Productpentapeptide repeat-containing protein 
Protein accessionYP_001539605 
Protein GI159040352 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.985776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.176917 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCCC GACCCTCGGC GTCCCGACGT TCCACCGGTC CACGGAAGCG GCGGGAGCCG 
CGTAGCCCGG TCCCTCCGGC GGAGGTCAGC CTGTATGAGG CGACGGTGTT GGAGCCGGAG
TCGACGCTGG AGCGCCAGGC GTTTTACCAG GCGCGGCTGA CCGGTCAGGA CGCCTCGTCG
GTGACCTTCA GGCAGTGCCG GTTCCGTGGG GCTGACCTGT CTGAGTGCCG ACTGGATCAG
GTGGCTTTCA GTGACTGCCT GGTGACGGAT TCCAGTTGGG CCAATCTGCG CGCCGACGGT
GGAGATATGT CCCGGGTGCG GTTGGCCCAG AGCAGGATGA CGGGTGTGAC GTGGGCGAAC
GGTGGGCTGC GGGATGTCAC CGTCACCGGG TGCCGCGTGG ACCTGTCGGC GTGGCGGATG
ACGACCTTCG ACGCGGTGAG TTTCGAGGAC TGCAACCTGC AGGGTGCCGA CTTCACCAAC
GCGGACCTGC GGGGCGTGGC CTTTCGGGGC TGTGACCTGA CCGGGGCGGT GTTCCACCAT
GCGTCGATGG AGGGCACCCG GTTTCGTGGC TGCACCCTGG CCGGCGTCGG CGACATCTCC
AGCTGGCGTG GCGCCGTCGT GCACCACGAG GACCTGATCA GCCTGTCCTA CGGCCTTGCG
CAGGCGGCCG GAATCCGCAT TGAGGAGTAG
 
Protein sequence
MPARPSASRR STGPRKRREP RSPVPPAEVS LYEATVLEPE STLERQAFYQ ARLTGQDASS 
VTFRQCRFRG ADLSECRLDQ VAFSDCLVTD SSWANLRADG GDMSRVRLAQ SRMTGVTWAN
GGLRDVTVTG CRVDLSAWRM TTFDAVSFED CNLQGADFTN ADLRGVAFRG CDLTGAVFHH
ASMEGTRFRG CTLAGVGDIS SWRGAVVHHE DLISLSYGLA QAAGIRIEE