Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4864 |
Symbol | |
ID | 5707603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 5519126 |
End bp | 5519815 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641274260 |
Product | pentapeptide repeat-containing protein |
Protein accession | YP_001539605 |
Protein GI | 159040352 |
COG category | [S] Function unknown |
COG ID | [COG1357] Uncharacterized low-complexity proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.985776 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.176917 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGCCC GACCCTCGGC GTCCCGACGT TCCACCGGTC CACGGAAGCG GCGGGAGCCG CGTAGCCCGG TCCCTCCGGC GGAGGTCAGC CTGTATGAGG CGACGGTGTT GGAGCCGGAG TCGACGCTGG AGCGCCAGGC GTTTTACCAG GCGCGGCTGA CCGGTCAGGA CGCCTCGTCG GTGACCTTCA GGCAGTGCCG GTTCCGTGGG GCTGACCTGT CTGAGTGCCG ACTGGATCAG GTGGCTTTCA GTGACTGCCT GGTGACGGAT TCCAGTTGGG CCAATCTGCG CGCCGACGGT GGAGATATGT CCCGGGTGCG GTTGGCCCAG AGCAGGATGA CGGGTGTGAC GTGGGCGAAC GGTGGGCTGC GGGATGTCAC CGTCACCGGG TGCCGCGTGG ACCTGTCGGC GTGGCGGATG ACGACCTTCG ACGCGGTGAG TTTCGAGGAC TGCAACCTGC AGGGTGCCGA CTTCACCAAC GCGGACCTGC GGGGCGTGGC CTTTCGGGGC TGTGACCTGA CCGGGGCGGT GTTCCACCAT GCGTCGATGG AGGGCACCCG GTTTCGTGGC TGCACCCTGG CCGGCGTCGG CGACATCTCC AGCTGGCGTG GCGCCGTCGT GCACCACGAG GACCTGATCA GCCTGTCCTA CGGCCTTGCG CAGGCGGCCG GAATCCGCAT TGAGGAGTAG
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Protein sequence | MPARPSASRR STGPRKRREP RSPVPPAEVS LYEATVLEPE STLERQAFYQ ARLTGQDASS VTFRQCRFRG ADLSECRLDQ VAFSDCLVTD SSWANLRADG GDMSRVRLAQ SRMTGVTWAN GGLRDVTVTG CRVDLSAWRM TTFDAVSFED CNLQGADFTN ADLRGVAFRG CDLTGAVFHH ASMEGTRFRG CTLAGVGDIS SWRGAVVHHE DLISLSYGLA QAAGIRIEE
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