| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4810 |
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| Symbol | |
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| ID | 5708146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 5440742 |
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| End bp | 5441566 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641274206 |
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| Product | transcription activator effector binding |
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| Protein accession | YP_001539551 |
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| Protein GI | 159040298 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0789] Predicted transcriptional regulators
[COG4978] Transcriptional regulator, effector-binding domain/component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.858088 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGACC TGATCCCGAT CGGGCGTTTC TCCCGGATGA GCCGGCTGTC AGTCAAGGCC
CTGCGCTTCT ACAATGAGCA GGGCCTGCTC GCACCCGCTT GGGTCGACCC GTCCTCGGGC
TACCGCTACT ACCGGCGGGC CCAGGCCGAG CGGGCCGAGG CGATCCGGGT ACTACGCGCG
ATCGACATGC CGATCGCGGA TATCCGCGAC CTACTCGCCG ACGACGACCC GGAACTGACC
GGCAAACGCC TCGTCGCGCA CCGGGAGCGG TTGCGGGCCC GGCTCGCCGA GCAGGAGCGG
ATGCTGCGGT TCCTCGAAGT ACTCATCGAT CGGGGAGGAC GTGTCATGCC GTACGACGTC
ATCGTGAAGG AAGCCGCCAC TATTCCGGTG GCCAGCCTCA CCCTGCACAC CAGCCTCGAT
GCGATCGGCG CCGACATGGG CCGCGGCTTC GGCACGGTCG TCGACGCCAT CGGCAACGCC
GGCGCCGAGT CCAACGGAAA GCCGTTCGTC ATCTACCACG ACGTCATCGA CGAACAGAAC
AACGGTGACA TCGAGATCTG CATCCCGGTC CCGGCCGGCA CCGTCCTGCC CGGCGACCCG
GTCCGCTACC GTGAGCTCCC CGGCGGCCGG GTCGCCACCA CCGTCCACCG AGGGCCGTAC
CAGGAGATCA GCCCCGCCTA CCACGTCGTC ACCGGCTGGA TCGAGCAGGA GGGTATGCAT
CCGGCGGGCC CGCCGCGCGA GGTCTACCTC AACGACCCTC AAACGGTCAG TCCCGCTGAG
CTGCTCACCG AGGTGCAGTT TCCCATCGAC AGGGCGCCGC GCTGA
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| Protein sequence | MDDLIPIGRF SRMSRLSVKA LRFYNEQGLL APAWVDPSSG YRYYRRAQAE RAEAIRVLRA
IDMPIADIRD LLADDDPELT GKRLVAHRER LRARLAEQER MLRFLEVLID RGGRVMPYDV
IVKEAATIPV ASLTLHTSLD AIGADMGRGF GTVVDAIGNA GAESNGKPFV IYHDVIDEQN
NGDIEICIPV PAGTVLPGDP VRYRELPGGR VATTVHRGPY QEISPAYHVV TGWIEQEGMH
PAGPPREVYL NDPQTVSPAE LLTEVQFPID RAPR
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