Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4775 |
Symbol | |
ID | 5704442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 5404434 |
End bp | 5405399 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641274173 |
Product | ROK family protein |
Protein accession | YP_001539519 |
Protein GI | 159040266 |
COG category | [G] Carbohydrate transport and metabolism [K] Transcription |
COG ID | [COG1940] Transcriptional regulator/sugar kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000119415 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGATCCAGC CCGAAGGCCG TTGCGTCCTC GCCGTCGACG TCGGCGGGAC GACCATCAAG GCGGCGGTGG TCGGCGAGGA CGGCCGATTC CTGAGTTCCC TGACCGCGCC GTCGCAGGCG GACGACGACC CGGTCGAGGC GATCCGGTCG CTGTGCCGCG AACTGCGCGC GCATGCGCTC TCGCTCGGCA GCACACCCGC CGCGATCGGC GTGGTGACGC CCGGCCTCGT GGACGAGCGG GACGGAGTGG TGCGGTACGC GGCAAACCTT CGCCTGCGCG ACGTGCCACT GCGCGCCCTC GTCGGCGGCG ACCTCGGACT ACCCGTGGTG GTCGGGCACG ACGCGCGGGC GGCCGGCATC GCGGAGGCCA CGGCGGGCGC GGCCGTCGGG TTGGACAACT TCCTGCTACT GCCGCTGGGC ACCGGCATCG CCGCGGCGGT GGTGGTCCAT GGTGTCCCCG TGGCCGGCGC GACCCGCGCG GCCGGCGAGG TCGGCCACAT GCCGGTCTAT CCGGGCGGGG AGCCGTGCAG TTGCGGGCAG CGGGGATGCC TGGAGGTGTA CGCCTCGGCC GGCGGGATGG CACGTCGCTA TGCCCGGCGC GTCGGCACCT CGGGGGCGGA CAGCCAGGCC ATAGCCGACG CGGTGGCCAC CGATCCGCAC GCCCGTGCTG TCTGGAACGA CGCCACCCAG GCGTTGGGAA CCGCCCTGGC CACCCTCACC CTGGCCCTCG ACCCGGCCCG CGTCGTGTTG GGAGGTGGGC TCGCCGAGGC AGGCGCACTC TTCCTCGACC CGGTGCGCGA GGCCCTGCAC GGCGCCCTCG CCTGGCGGAA CCCGCCCCCC GTGCTGCGCT CCGCCTTCGG CGCCCAGGCG GCACAGGTCG GCGCCGCCAT CATGGCCCGG CGGAAGGCCG GGCTGTCCGT TCCCGACGGC TGGGGTGCGC CCGACCTCGT GCCGCCGGCC GCATGA
|
Protein sequence | MIQPEGRCVL AVDVGGTTIK AAVVGEDGRF LSSLTAPSQA DDDPVEAIRS LCRELRAHAL SLGSTPAAIG VVTPGLVDER DGVVRYAANL RLRDVPLRAL VGGDLGLPVV VGHDARAAGI AEATAGAAVG LDNFLLLPLG TGIAAAVVVH GVPVAGATRA AGEVGHMPVY PGGEPCSCGQ RGCLEVYASA GGMARRYARR VGTSGADSQA IADAVATDPH ARAVWNDATQ ALGTALATLT LALDPARVVL GGGLAEAGAL FLDPVREALH GALAWRNPPP VLRSAFGAQA AQVGAAIMAR RKAGLSVPDG WGAPDLVPPA A
|
| |