Gene Sare_4568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_4568 
Symbol 
ID5705351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp5185871 
End bp5186854 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content71% 
IMG OID641273980 
Productmethyltransferase type 12 
Protein accessionYP_001539327 
Protein GI159040074 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2813] 16S RNA G1207 methylase RsmC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00176923 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGAACGGA AAGACCCGGA AGTCGTGGCC GATGTGGCCG CAGTCGCCGC GCTGCTGCAG 
ATCGGCGCCG AGATCGGAGC CGATCAGGTT CTGGACGCGG CCGAGCCGTT CAGCGCCGCG
GACGTGGCCA AGGCAGTTGA CGTCCCGGTC GCCGGCATCA CCGCGTACCT GGGGGCGCTG
CTCGCCGCAG GCCTGATCGC CGAGACCGAG GTTCCGGGCA CCTACCAGGT GGCCGCCGAC
TACCCCGACC TGCGTTACCA GGCCGGGTAC ATGTGCTGGG CGATGAACGC GAACGGCCCC
TTCCTGGACA ACGCCCGCGC GTTCCTCACG GATCCGGCCG CGGCCGCCCA GGTCCACCGG
CGCAACGGGC GGCGGGTCGC GATCAGCTCG CGGTGGATCG GCGAGCGCGC GTTCTACCCG
CAGCTCATCG AGCAGGTTGT GGCAGCCGGG GCGCTGCGGG TGTCGGACCT CGGCGCCGGC
GCCGGCGGGC TGCTCATCAA GCTGCTGCAG GAGGACCCGG CCCGTACCGG TACGGCGGTC
GACAGCAACG GCGCGGCCTG TGCTGCGGCG CGGCAGGCCG CCCTCGCCGG CGGGGTGCAC
GATCGGCTGA CGGTCGTCGA GCGGCCGATC GAGTCGCTGG TCGATGACCC CGAACCGGTC
GCGGGCGCCG ATGCCATTCT CGCCAGCTAT GTCATGCACG ACATCGTGGC CGACGACCGT
ATCGCCCTGG GTGTCCTGGG CGCCCTGCGC GACGCGCTGG CCCCAGGCGG ATTTCTCGCC
GTGGCCGACG CGGTCTCCTA CGCGCGGCGA CCGGAGGAGC GCACGTTCAG CGCCCTCTTC
ACCTACCTGC ACGCCACCTT CATGAGCGTC ACCCTCCCCG CCGAGCAGGA ATGGCTGGAC
AAGTTCGCGG CGGCCGGCTT CTCGCAAACC AAGGTCGTTC CGATCGGCCT GCCCGGCGGT
CGGCTCTTCG TGGCGACCAG ATGA
 
Protein sequence
MERKDPEVVA DVAAVAALLQ IGAEIGADQV LDAAEPFSAA DVAKAVDVPV AGITAYLGAL 
LAAGLIAETE VPGTYQVAAD YPDLRYQAGY MCWAMNANGP FLDNARAFLT DPAAAAQVHR
RNGRRVAISS RWIGERAFYP QLIEQVVAAG ALRVSDLGAG AGGLLIKLLQ EDPARTGTAV
DSNGAACAAA RQAALAGGVH DRLTVVERPI ESLVDDPEPV AGADAILASY VMHDIVADDR
IALGVLGALR DALAPGGFLA VADAVSYARR PEERTFSALF TYLHATFMSV TLPAEQEWLD
KFAAAGFSQT KVVPIGLPGG RLFVATR