Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4327 |
Symbol | rplJ |
ID | 5706889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 4894339 |
End bp | 4894884 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641273746 |
Product | 50S ribosomal protein L10 |
Protein accession | YP_001539099 |
Protein GI | 159039846 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0244] Ribosomal protein L10 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGACA AGCCGATCCG GGCCGACAAG GCCACGGCCG TCGCTGAGCT GACCGAGAGC TTCCGCAACG CGGGCGCGAC CGTGCTGACC GAGTACCGTG GTCTGACGGT CTCCCAGCTC ACCCAGCTGC GGCGCTCGCT CGGCACGGAG ACCACCTACA CCGTCGCCAA GAACACGCTG GCCAAGCGTG CCGCGACGGA CGCGGGCATC TCCGGGCTCG ACGAGCTGTT CACCGGTCCT ACCGCGCTGA CTTTCGTTTC GGGCGACGTC GTCGAGGCGG CCAAGGGTCT TCGCGACTTC GCGAAGACCA ACCCGAAGCT GGTCATCAAG GGCGGTGTGT TCGAGGGCAA GGCCATCTCC GCGGCCGAGG TCACGAAGCT CGCCGACCTG GAGTCCCGCG AGGTGCTGCT GGCCAAGCTG GCCGGCGCCA TGAAGGGCAA CCTGAGCAAG GCCGCGTCGC TGTTCCAGGC GCCGCTGGCC AAGACCGCCC GCGCGGCGGC TGCCCTACAG GACAAGCGCG AGAAGGAGGG CGCCGAAGCG GCCTGA
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Protein sequence | MADKPIRADK ATAVAELTES FRNAGATVLT EYRGLTVSQL TQLRRSLGTE TTYTVAKNTL AKRAATDAGI SGLDELFTGP TALTFVSGDV VEAAKGLRDF AKTNPKLVIK GGVFEGKAIS AAEVTKLADL ESREVLLAKL AGAMKGNLSK AASLFQAPLA KTARAAAALQ DKREKEGAEA A
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