Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4317 |
Symbol | |
ID | 5706879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 4879398 |
End bp | 4880591 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641273736 |
Product | elongation factor Tu |
Protein accession | YP_001539089 |
Protein GI | 159039836 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0050] GTPases - translation elongation factors |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00485] translation elongation factor TU |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00391297 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGCGAAGG CGAAGTTCGA GCGGACTAAG CCGCACGTCA ACATCGGCAC CATTGGTCAC ATCGACCACG GTAAGACGAC GCTGACGGCG GCCATCACCA AGGTCCTGCA CGACCAACAC CCGGACCTGA ACCCGTACAT GCCGTTCGAC GAGATCGACA AGGCGCCGGA GGAGAAGGCC CGCGGTATCA CGATCTCGAT CGCGCACGTC GAGTACCAGA CCGAGGCGCG GCACTACGCG CACGTCGACT GCCCCGGTCA CGCTGACTAC ATCAAGAACA TGATCACCGG TGCGGCCCAG ATGGACGGCG CGATCCTCGT GGTCGCGGCG ACCGACGGTC CGATGCCGCA GACCCGCGAG CACGTGCTGT TGGCCCGTCA GGTCGGTGTG CCGTACATCG TCGTGGCGCT CAACAAGAGC GACATGGTCG ATGACGAGGA GCTCCTCGAG CTCGTCGAGC TCGAGGTCCG CGAGCTGCTC TCCTCTCAGG AGTACCCGGG CGACGACCTG CCGGTCGTGC GGGTGTCCGC GCTGAAGGCC CTTGAGGGTG ACCCGGAGTG GGCCGGGAAG CTGATGGAGC TGATGACCGC GGTCGACACC TCCATCCCGC AGCCGGAGCG CGAGACCGAG AAGCCGTTCC TGATGCCGAT CGAGGACGTC TTCACGATCA CCGGTCGGGG CACCGTCGTC ACCGGTCGCG CCGAGCGTGG CATCCTCAAG CCGAACGAGG AGGTCGAGCT CGTCGGCATC CGCGAGAAGT CGACGAAGAC CACCTGCACC GGCATCGAGA TGTTCCGCAA GCTGCTGGAC GAGGCTCGCG CGGGCGAGAA CGTCGGCCTG CTGCTGCGTG GTGTGAAGCG CGAGGACGTC GAGCGCGGCA TGGTCGTCAT CAAGCCGGGC ACGGCCACCC CGCACACCGA GTTCGAGGCG ACGGTCTACA TCCTCTCCAA GGAGGAGGGC GGCCGGCACA CCCCGTTCTT CCAGAACTAC CGTCCGCAGT TCTACTTCCG GACCACGGAC GTCACCGGTG TCGTCACCCT CCCCGAGGGC ACCGAGATGG TCATGCCGGG TGACAACACC ACGATGACCG TGAAGCTGAT CCAGCCCATC GCGATGGAGG AAAACCTCAA GTTCGCGATC CGGGAGGGCG GCCGGACGGT CGGCGCTGGG CGCGTCACCA AGATCATCAA GTGA
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Protein sequence | MAKAKFERTK PHVNIGTIGH IDHGKTTLTA AITKVLHDQH PDLNPYMPFD EIDKAPEEKA RGITISIAHV EYQTEARHYA HVDCPGHADY IKNMITGAAQ MDGAILVVAA TDGPMPQTRE HVLLARQVGV PYIVVALNKS DMVDDEELLE LVELEVRELL SSQEYPGDDL PVVRVSALKA LEGDPEWAGK LMELMTAVDT SIPQPERETE KPFLMPIEDV FTITGRGTVV TGRAERGILK PNEEVELVGI REKSTKTTCT GIEMFRKLLD EARAGENVGL LLRGVKREDV ERGMVVIKPG TATPHTEFEA TVYILSKEEG GRHTPFFQNY RPQFYFRTTD VTGVVTLPEG TEMVMPGDNT TMTVKLIQPI AMEENLKFAI REGGRTVGAG RVTKIIK
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