| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4202 |
|---|
| Symbol | |
|---|
| ID | 5704202 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 4769253 |
|---|
| End bp | 4770140 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641273621 |
|---|
| Product | succinyl-CoA synthetase subunit alpha |
|---|
| Protein accession | YP_001538974 |
|---|
| Protein GI | 159039721 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0074] Succinyl-CoA synthetase, alpha subunit |
|---|
| TIGRFAM ID | [TIGR01019] succinyl-CoA synthetase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.886218 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00857355 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATCT GGCTGACCAA GGACTCGAAG GTCATCGTGC AGGGGATGAC CGGTTCCGAG
GGTTCCAAGC ACACCCGGCG GATGCTCGCC GCAGGTACCG ACATCGTCGG TGGTGTGAAC
CCGCGCAAGG CGGGCACCAC CGTCGACTTC GACGGCGCCC AGCTGCCGGT CTTCGCGAGC
GTCGCGGACG CGATGCGGGA GACCGGCGCC GACGTGACGG TCATCTTCGT GCCGCCGCAG
TTCACCAAGG GCGCGGTGAT CGAGGCGATC GACGCCGGCA TCTCACTTGC CGTCGTGATC
ACCGAAGGTG TGCCGGTGCA CGACACCGCC GCCTTCTGGG CGTACAACGT GGCGCAGGGC
GAGCGGACCC GGATCATCGG GCCGAACTGT CCGGGTATCG TGTCGCCGGG CGCCGCCAAC
GCCGGCATCA TCCCGGCCGA CATCACCGGA ACCGGCCGGA TCGGCCTGGT CAGCAAGAGC
GGCACGCTGA CCTACCAGAT GATGTACGAG CTGCGCGACA TCGGCTTCTC CACCTGCGTC
GGGATCGGCG GTGACCCAGT CATCGGCACC ACGCACATCG ACGCGCTGGC CGCGTTCGAG
GACGACCCGG ACACCGACGC GATCGTCATG ATCGGTGAGA TCGGTGGTGA CGCCGAGGAG
CGGGCTGCCG AGTTCATCAA GGCGAACGTC ACCAAGCCGG TGGTCGGCTA CATCGCTGGC
TTCACCGCGC CGCCCGGCAA GACGATGGGG CACGCCGGTG CGATCATCTC CGGCTCGGCC
GGCACCGCGG AGGCCAAGAA GACTGCCTTG GAGGCGGTTG GCGTCAAGGT CGGCAAGACT
CCGACCGAGA CGGCGGGGCT GATGCGACAG ATCATGTCGG CGGGCTGA
|
|---|
| Protein sequence | MAIWLTKDSK VIVQGMTGSE GSKHTRRMLA AGTDIVGGVN PRKAGTTVDF DGAQLPVFAS
VADAMRETGA DVTVIFVPPQ FTKGAVIEAI DAGISLAVVI TEGVPVHDTA AFWAYNVAQG
ERTRIIGPNC PGIVSPGAAN AGIIPADITG TGRIGLVSKS GTLTYQMMYE LRDIGFSTCV
GIGGDPVIGT THIDALAAFE DDPDTDAIVM IGEIGGDAEE RAAEFIKANV TKPVVGYIAG
FTAPPGKTMG HAGAIISGSA GTAEAKKTAL EAVGVKVGKT PTETAGLMRQ IMSAG
|
|---|
| |