Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_4140 |
Symbol | |
ID | 5705585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 4705945 |
End bp | 4707051 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641273568 |
Product | N-succinyldiaminopimelate aminotransferase |
Protein accession | YP_001538921 |
Protein GI | 159039668 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | [TIGR03539] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.867426 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0592694 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | CTGAACCGGC CCACGCCAGT CTCGACTCGG CTGCCCGAGT TCACCTGGGA CGCCCTGGAC GCCGCGGCGG CCGTGGCCGC GGCGCATCCA GGGGGTCTGA TCAACCTCTC CATCGGTACC CCGGTCGATC CGGTACCGCC GGTGATCCGG GAGTCGCTGG CTGACGCGTC GGATGCTCCC GGGTACCCCC GGACCGCCGG CTCGCCGGCG CTGCGGGCCG CGATCGCGGC TTGGGCGGCG CGAACCTGCG GGGCTGAACC GGATCGGCTC GGCGTGCTGC CAGCGGTCGG CTCGAAGGAG TTGGTGGCCT GGTTGCCGAC GCTGCTGGGG ATCGGGCCGC AGGACGTGGT CGTGGTGCCG TCAGTCGCGT ATCCGACCTA CGAGGATGGG GCCCGACTCG CCGGGGCGAC GGTCGTGCGG GCCGATTCGC TGACCGCCGT TGGCCCGAAC CCCCGGGTCC GCCTGGTCTG GGTGAATTCG CCGGGAAACC CGACGGGCCG GGTGCTGCCC GCCGCGCACC TGCGCAAGGT CGTCGACTGG GCCCGCGAGC GCGGCGCAGT TGTCGCCAGC GACGAGTGCT ACCTGCCGTT GGGCTGGGAG ACCGAGCCGG TCTCGGTGCT GTCGCCGCAG GTGTGCGGTG ATTCGTACGA TCGTGTGCTG GCAGTGCACT CGCTGTCGAA ACGCTCCAAC CTCGCCGGGT ATCGGGCCGG CTTCGTGGCC GGCGACCCGG CGCTCGTCGC CGAGTTGCTC AAGGTGCGCA AGCACGCCGG GATGATCGTC CCGGCGCCGG TGCAGGCCGC GATGGTAACC GCCCTTCGGG ACGAGCAACA CGCCACGGAG CAGCGGGAGC GCTACCGGAA CCGGCGTGCT GTGCTGCGTG CCGCGTTCAC CGCCGCCGGG TTCACCGTCG AGCATTCGGA GGCCGGACTC TACCTGTGGC TGACCCGGGA CGAGGACTGC TGGGCGACGG TCGACTGGCT GGCCCGGCGG GGGATCCTGG TGGCGGCGGG TGCCCTGTAC GGGCCGGCCG GCGCTCGGCA TGTTCGTGTG GCGCTGACCG AGACCGACCA ACATGTGGCG GCGGTCGCCG ACCGGTTGGC CGACTGA
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Protein sequence | MNRPTPVSTR LPEFTWDALD AAAAVAAAHP GGLINLSIGT PVDPVPPVIR ESLADASDAP GYPRTAGSPA LRAAIAAWAA RTCGAEPDRL GVLPAVGSKE LVAWLPTLLG IGPQDVVVVP SVAYPTYEDG ARLAGATVVR ADSLTAVGPN PRVRLVWVNS PGNPTGRVLP AAHLRKVVDW ARERGAVVAS DECYLPLGWE TEPVSVLSPQ VCGDSYDRVL AVHSLSKRSN LAGYRAGFVA GDPALVAELL KVRKHAGMIV PAPVQAAMVT ALRDEQHATE QRERYRNRRA VLRAAFTAAG FTVEHSEAGL YLWLTRDEDC WATVDWLARR GILVAAGALY GPAGARHVRV ALTETDQHVA AVADRLAD
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