| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_4018 |
|---|
| Symbol | |
|---|
| ID | 5706422 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 4569996 |
|---|
| End bp | 4570793 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641273443 |
|---|
| Product | ATP synthase F0, A subunit |
|---|
| Protein accession | YP_001538799 |
|---|
| Protein GI | 159039546 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0356] F0F1-type ATP synthase, subunit a |
|---|
| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.457408 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000501156 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGTTCGGAG TGGCGAACGT CCTGGCACAG GGCGAGGCAG CATTCCCTCC CAGCGTGGAG
GATTTCTATC TGCCCAGCAT CGTGCCGTGG GGTGCGGAGA ACTCCTACTG GTTTACCAAG
ATCACGGCGA TGGTCTGGCT CGCCGTGGGC ATTCTGATCA TTTTCTTCCT GGCCAGCTAC
CGGAATCCAC AGCTGGTGCC GACGAAGAAG CAATGGCTGG CCGAGTCGGT CTACGGCTTC
GTGCGGAACA ACATCGCAGT CGACATGATC GGGCACGCGG GGGTGCGGTT CGCGCCGTAC
TTCACCACGC TGTTCTGTTT CATCCTGCTG ACCAACTTCT TCGCGATCGT TCCGTTCCTC
CAGATCTCGC CGAACTCGCA CATCGCCTTC CCGGCTTTCC TGGCCGTGAT CAGCTACGTG
CTCTTCATCT ACGCGGGCGT CCGGCACCAC GGTGCCGGAA AGTTCTTCAA GAATTCACTG
GTCCCACCGG CGCCCTGGTA CATCCTGCCG CTGCTGGTCC CGATCGAGTT CTTCTCGACC
TTCCTCGTTC GGCCGTTCTC GCTCGCCATC CGTCTCTTCG CGAACATGTT CGCCGGCCAC
ATGCTCCTGC TGGTCTTCAC CCTCGGCGGC TTCGCGATGT TGAACGCCAA CGTCTGGCTG
GCGCCGGTGT CGGTGCTGTC CTGGGCGATG ACCATCGCGC TTACCTTCCT CGAGTTCCTG
GTGATCGTCC TCCAGGCGTA CGTCTTCACT GTCCTGACCG CGAGCTACGT CCAGGGCGCG
CTCGCCGACG AGCACTGA
|
|---|
| Protein sequence | MFGVANVLAQ GEAAFPPSVE DFYLPSIVPW GAENSYWFTK ITAMVWLAVG ILIIFFLASY
RNPQLVPTKK QWLAESVYGF VRNNIAVDMI GHAGVRFAPY FTTLFCFILL TNFFAIVPFL
QISPNSHIAF PAFLAVISYV LFIYAGVRHH GAGKFFKNSL VPPAPWYILP LLVPIEFFST
FLVRPFSLAI RLFANMFAGH MLLLVFTLGG FAMLNANVWL APVSVLSWAM TIALTFLEFL
VIVLQAYVFT VLTASYVQGA LADEH
|
|---|
| |