Gene Sare_3961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_3961 
Symbol 
ID5704912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp4501681 
End bp4502394 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content74% 
IMG OID641273386 
Productthymidylate kinase 
Protein accessionYP_001538742 
Protein GI159039489 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.057611 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.564595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCAAAT CGAAGGAGGC GCGACGGGCT GGGGCCAGGT TGCGCACCAT CGCCCTGATC 
GGCATCGACG GCTCGGGTAA GACGACTCAG GCACGCCGGC TCGCCGCCGC GTTGACCGGG
GCAGGGCTGC CCGCCACCTA CCACCGCAAC GCCGGCGGTC GGCGCTTCCT GGGCCGAGTA
GCACGGCGGC TGGGTCGGCC GGACCCGCAG CGGTTGCTCG GGCGCACCGG CCTGTTGGTC
GCGGAGTCGG TGTTGCGCTG GCTTGCCATT GCCGCCGCCC GGCTGAGCCG CCTGCTGACT
GGCCGGGTCG CGGTGATGGA CCGCTACTCC GCCTGCCAGT ACGCGAGCAT CCGGGCGCAC
GGTGGCCACC GCTGGGAGCG GCTGGCCCGG CTGGGCTACC GAGTGTTTCC TCGGCCGCAG
GTGACGTTCC TGCTGACCGT CGATCCCGCC GAGGCGTACC GGCGGATCGA GCGGCGCGGC
ACCGACCACG AGAGCATGCG GTACCTGACC GCGGCCGATC GCGCGTACCG GACACTGCCG
GAACACCACA CGTTCGTCGT GGTGGACGCA AGCGGTCCGG CGGACGAGGT GAGCCGGCGG
ATTCGGGACC ATGTGGACGG TTGGTTGGGG GCGGCGCGGG CGGCGCGGGC GGCCGGGCTG
CCCCAGGAGC GGGACCGGGT GCCGGAGCGG GACCGGGCGC CGGTGCGCGT GTGA
 
Protein sequence
MAKSKEARRA GARLRTIALI GIDGSGKTTQ ARRLAAALTG AGLPATYHRN AGGRRFLGRV 
ARRLGRPDPQ RLLGRTGLLV AESVLRWLAI AAARLSRLLT GRVAVMDRYS ACQYASIRAH
GGHRWERLAR LGYRVFPRPQ VTFLLTVDPA EAYRRIERRG TDHESMRYLT AADRAYRTLP
EHHTFVVVDA SGPADEVSRR IRDHVDGWLG AARAARAAGL PQERDRVPER DRAPVRV