Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3927 |
Symbol | |
ID | 5703778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 4470908 |
End bp | 4471930 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641273352 |
Product | hypothetical protein |
Protein accession | YP_001538709 |
Protein GI | 159039456 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0572] Uridine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.415974 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00805861 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGCTGGCCG GGTCCAGCCG CCACTCCAGC ACCGCCCGCT CGACGACGAT GGCGCCGGGC AGCTCACCCT GCTCCACCCG CTGCCGTTCC GTGCGGGTGT CGATCAGCAA CGCCCCGGCA CGGATCGCCT CGACGGCCTG GTGTGGGGTC AGCCGGCGTA CCCCGGCGCG GGCTTGTTCC AACAGGGCGT CAACGCCCGG ACTCGTCACG CTGTGGGACA CCAGCCGATC ATGCCGCTCC GCGTGGCCAC GCGCGGTCGA ACGGCATCGG CCACCGGTAC GACCGCCCGA ACGGGCGACG GAGCACGCAG GCGCGGTCCG TGCCGGCCGC TACCGTCGGT CCGTGGTGGT TGCGGTGATG GAGTCGTACG CCCTGCTCGC ACGTCGGGTT TGTGCCGCGC CGGCACGGCT GGGGCGTACC CGACTGGTGG CAGTGGACGG GCCCAGCGGC GCGGGCAAGA GCTGGTTCAC GGCGCGCCTC GCGGATGCCC TCGCCGGCCT GCCCAACAGC GCCCGACCAG CGGTGGTGCA CACCGACGAT CTGCTGGAGG GGTGGGCCGA CCAGTTCACC TTCTGGCAGC GGTTGGAGGA AGGGGTGCTG GCGCCGGTGC GGTCGGGGCG GGCCGGGGAG TACCGACGGT TCAGCTGGGT ACGGCGGGCG TTCCTGCCCC GTCCGGTGCC GGTGCCGGTG TCACCGGTCC TGCTGCTGGA GGGGGTGAGT GCGGCGCGTG CCACGGCGGC GCCGGAGCTG AGCCTCGCCG TGTACGTGAC CGCCCCGGCG CAGCTGCGGC TCACCCGGGC GGTGGCCCGC GATGGCCCGG GGATCCTGCC TGAGCTGCGT CGCTGGCACG CCGGCGAACG AGCCCACTTC ACCGCCGACC GTACCGCGGA CCGAGCAGAC CTGGTGGTCG ACGGCGCGCC GGAACTTCCC CACGACCGGG CTCGGTACTA CCTGCGGCGG GGCCGGCCGG CGGTGCCGGC ATACGATGCC GGTCATGACC ACACCGATCA TGTCCGATTC TGA
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Protein sequence | MLAGSSRHSS TARSTTMAPG SSPCSTRCRS VRVSISNAPA RIASTAWCGV SRRTPARACS NRASTPGLVT LWDTSRSCRS AWPRAVERHR PPVRPPERAT EHAGAVRAGR YRRSVVVAVM ESYALLARRV CAAPARLGRT RLVAVDGPSG AGKSWFTARL ADALAGLPNS ARPAVVHTDD LLEGWADQFT FWQRLEEGVL APVRSGRAGE YRRFSWVRRA FLPRPVPVPV SPVLLLEGVS AARATAAPEL SLAVYVTAPA QLRLTRAVAR DGPGILPELR RWHAGERAHF TADRTADRAD LVVDGAPELP HDRARYYLRR GRPAVPAYDA GHDHTDHVRF
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