Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_3799 |
Symbol | |
ID | 5704550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 4328010 |
End bp | 4328810 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641273221 |
Product | ABC-2 type transporter |
Protein accession | YP_001538583 |
Protein GI | 159039330 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | [TIGR01291] ABC-2 type transporter, NodJ family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0103899 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACACAAC TCGCGGTGCG GCGGGCCCGA TCGGGTCTGG CGCGGGTGCC GGCGCTGGCG GTGTTGCAGT ACTACCTGGT CGGATACCGG CGTACCTGGC GGGGCGGGGT CCTCTCGTCG TTCCTGCTAC CCACGCTGAC CGTGCTCGGT TTCGGCGTGG GAGTCGGGGC ACTCATCGAC CAGGGTGTCG GCGGCGTTTC CTACCTGGAG TGGATCGTCG GGGGTTTGCT CGCGTCGACC GCGTTGCAGG TGGCGATCAC CGAGTCCAGC TGGCCGGTCT ACAGCAGCCT GCAATGGACC AAGATCTATT TTGCTCAGTT CGCCGCACCA CTGCGGGTGG CGGACATCCT CGCCGGTCAG CTGGCATTCG TTCTGTTCCG GGTGCTGGCC TCGGCCACGG CGTTCCTCGT GGTGACCGGC CTGCTGGGGG CACTGCGCTC GCCCTGGGCG GTGCTGGCGC TGCCGGTGGC GGCGCTGCTC GGCCTGGCTG TGGCTGCGCC CACCTTCGCC TACGCGGCAA CCGCCTCCAG CGACAGTTGG CTCGCGCTGC TGTTCCGTTT CGCGGTGATC CCGATGACGC TCTTCGCCGG GGTGTTCTTT CCGGTCGAGT CGCTGCCGGT GGGGCTGCGT TGGTTGGCGT ACGTGACGCC GCTGTGGCAC GCCGTTGACC TCAGCCGGGC GGCCACGCTC GGTGTTCCGC CGGTGTGGTC GATCACGGGT CACCTGCTCT ACCTCGCCGC CTGGGTAGTC GGCGGGTGGC TGCTCGCCCG CCGCGCCCTC GGCCGCAAGC TCGTCGTCTA G
|
Protein sequence | MTQLAVRRAR SGLARVPALA VLQYYLVGYR RTWRGGVLSS FLLPTLTVLG FGVGVGALID QGVGGVSYLE WIVGGLLAST ALQVAITESS WPVYSSLQWT KIYFAQFAAP LRVADILAGQ LAFVLFRVLA SATAFLVVTG LLGALRSPWA VLALPVAALL GLAVAAPTFA YAATASSDSW LALLFRFAVI PMTLFAGVFF PVESLPVGLR WLAYVTPLWH AVDLSRAATL GVPPVWSITG HLLYLAAWVV GGWLLARRAL GRKLVV
|
| |