| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3195 |
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| Symbol | |
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| ID | 5705630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 3685524 |
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| End bp | 3686861 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641272626 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001537993 |
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| Protein GI | 159038740 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.324382 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00530067 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGGGTGGCA ACGCCCGACC CCGCCGTGGA CTGACCCTGA TCGCAGCCTC CGCGTGCGTC
TTCATCGTGC AGCTGGACTT CTACGCGTTG AACCTCGCGC TGCCGTCGAT GGCGGCGGAA
CTGGGTAGCT CCACCACCGA TCTGCAATGG GTGATCAGCG GCTACATCCT CGCCCAGGCG
GCGTTCCTCA TTCCCGGCGG GAAACTCGGT GACATTCTCG GCCGCAGGCG GGTACTCGTC
GCCGGTTTGG TGACCTTCGG TGTGGGCTCG CTCGGTGCCG GTCTGGGCTC CGATCCGCCC
ATCGTCATCG CTTTTCGGGT CGTGCAGGGC ATGGGGTCAG GAATCGTGTT CCCCCTCGCT
TTCGCGGTAA TCACCGAGGC GTACCCGGGG CGGCAGGCGA AGCAGGCGAT CGGCAACGCC
TACGGCATCG GGGCGGTGGC GCTGGCGCTC GGACCGCTGC TCGGCGGTGG GGTCACCGAG
CTGATCAGCT GGCGAAGCGT GCTCCTGGTG AACGTGCCGT TGTGCCTCGC CGCCATCGGT
GTCGCCCTCG CCTGGCTACC GGAGTCGCGT GACCCCACCG TGCCCCGGAC GATCGACCTG
TACGGCCTGG TTGTGGTGGT ATTCGGGATC GTCGCGATCA CCGTGGCCGC CGATCGCATG
AACGCCTGGC GCCCGGTCGC TGCCGTCGCT CTCGCCGTCG GCGGGCTCGT GCTCCTGGTC
GCCTTTGTGC TACGGGAACG GGTGGCGGGA AATCCACTGG TAAGGCTGGA CCTGTTCCAC
GACACCGCAT TTGTGGCGGT GACTCTCATG GGAATGGTCG CCAACATTGC CTTCGTGGTT
GCGGTGTTCG CCACGACGAT CCATCTGCAA CAGGTCCGGG GCTACTCACC ATTTATTGCG
GGTATGGCGG TGCTCGCCGC CTCCATCAGC GGCGGGGCTG CCGGTCCGCT CGCGGGTAGC
ATCAGTCAGC GGGTCGAGAT TCGTCGATTG ATCGCCACGG CTACCCTGGT CGGCGCGCTT
GGTCTGCTCG TGGTGGCCTT CGGCGGCCAG ATTGGGCCGT ACCTGCTCGG TCTGGCGGTC
GCCGGGTTCG GCTACCGGAC CGGGTTCACC CTGACCAATC TCGGCACGCA GGCCATGGTT
CCGGCCGAAC GGGCCGGCGA GGCGTCCGGT GTCACGCTCG CGATCCTGTT CGCCGCCTCC
GGAGTCGCGG TCGCGGCGGC CGGCACGCTG ATCGAGCAGG GGGACCTGTC GACGGGCATC
ATGCGGGTCC TCCTGGGGAC CGCGATCGGT AGCGCCGTGG CCACGATAGT TCTGGCCAGG
ATCCTCCGAC GTCGCTGA
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| Protein sequence | MGGNARPRRG LTLIAASACV FIVQLDFYAL NLALPSMAAE LGSSTTDLQW VISGYILAQA
AFLIPGGKLG DILGRRRVLV AGLVTFGVGS LGAGLGSDPP IVIAFRVVQG MGSGIVFPLA
FAVITEAYPG RQAKQAIGNA YGIGAVALAL GPLLGGGVTE LISWRSVLLV NVPLCLAAIG
VALAWLPESR DPTVPRTIDL YGLVVVVFGI VAITVAADRM NAWRPVAAVA LAVGGLVLLV
AFVLRERVAG NPLVRLDLFH DTAFVAVTLM GMVANIAFVV AVFATTIHLQ QVRGYSPFIA
GMAVLAASIS GGAAGPLAGS ISQRVEIRRL IATATLVGAL GLLVVAFGGQ IGPYLLGLAV
AGFGYRTGFT LTNLGTQAMV PAERAGEASG VTLAILFAAS GVAVAAAGTL IEQGDLSTGI
MRVLLGTAIG SAVATIVLAR ILRRR
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