| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_3189 |
|---|
| Symbol | |
|---|
| ID | 5705802 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 3679093 |
|---|
| End bp | 3680421 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641272620 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001537987 |
|---|
| Protein GI | 159038734 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00704959 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGCGTGAAC TACTGAGCAA TCGAACCTAC CGCCGGCTGT TTACCGCCCA GGTAATCGCA
CTCGTCGGCA GTGGTTTGGC GACGGTGGCG CTCGGGCTGC TCGCCTACGA CCTCGCGGGC
GCACGGGCCG GGGAGGTCCT AGGAACCGCG CTGGCGATCA AGATGGTCGC GTACGTGTGC
GTATCGCCGC TGGTCGGTGC GGTGTTGGAC CGAGTGCCGC GCGGTGTGGT GATGGTGGGC
TCGGACCTGG TCCGATGCGG AGTCGTCCTG CTGCTGCCGT GGGTCGACGC GATCTGGCAG
GTCTACGTTC TCATCGCCGT ACTGCAGGCC GCGTCGGCCG CCTTCACGCC CACCTTTCAG
TCCGTACTCC CGGACGTCAT TCCGGACGAG GACGACTACA CGAAGGCGTT GTCCGCGTCG
CAGGTGGCTG TCGCTCTGGA GAACATCGCC AGCCCGGTCA TCGCCGCCGC GCTGCTACTC
GTCATGAACT TCAGTGTTCT GTTCGTGGGA ACGGCGGTGG GATTTCTCGC TTCCGCGCTG
TTCGTCAGTG CGGCAACGGT TCCCAGGGCA CGACGTAGCA GCCGTGTCCG CTTCTCCGCG
CGTCTGCTCG CCGGACTGCG CGTGTTCGCG GGCACGCCAC GGCTACGGGC GGTCCTGGCG
CTGAACATGG TGGTCGCTGG CTCGGGCGCC GTCACCCTGG TCAGCACCGT CAACGTCGTA
CGTGACCTGC TGGACGCCAC CGAATCACAC GTGCCGCTCC TGCTTGCGGT CTCCGGCCTC
GGCACCGTCA CCGCGGCGTT CGGCGCACCA CTGCTGCTGC GTCGACTGAG AGACCGACGC
ACGCTGCTCG CCGGTGCCGC CACGGCCGTG CTCGCACTGG CGGGCGCACT GGTGTTGTCA
ACCGTACCGT CCTGGTTCCT CGCGATCTGG GTGTGGCTAC TCATCGGCTT TGCCGGCGGA
TTGATCATCG TCACGATCAA CCGGGTGCTG CGCGCATCGT CGACCGCCTC CGACCGGCCG
GCCCTGTTCG CCGCCCAGTT CTCCCTGTCG CACCTCTGTT GGCTGATCAC CTATCCCCTC
ACCGGCTGGG TGGGGGCGAC CGTCGGCTTC ACCGCGGCAT GGTCGCTGCT CATGGGCCTG
GTGCTCGTGG CTGGACTCGC CGCCACCTGG CTCTGGCCGG CCCGCCTTCT CGAGACCTTC
CGGCATCAGC ATGGCGCCGA TACGGACCAC GAGCACCTGG ACGACGCCGA GTGGGACGGG
GCGGCCTGGG TGCACACCCA CCGCGTCCAG ATCGACGGCA ACCACACGCG ATGGCCCCAA
CCCGTGTGA
|
|---|
| Protein sequence | MRELLSNRTY RRLFTAQVIA LVGSGLATVA LGLLAYDLAG ARAGEVLGTA LAIKMVAYVC
VSPLVGAVLD RVPRGVVMVG SDLVRCGVVL LLPWVDAIWQ VYVLIAVLQA ASAAFTPTFQ
SVLPDVIPDE DDYTKALSAS QVAVALENIA SPVIAAALLL VMNFSVLFVG TAVGFLASAL
FVSAATVPRA RRSSRVRFSA RLLAGLRVFA GTPRLRAVLA LNMVVAGSGA VTLVSTVNVV
RDLLDATESH VPLLLAVSGL GTVTAAFGAP LLLRRLRDRR TLLAGAATAV LALAGALVLS
TVPSWFLAIW VWLLIGFAGG LIIVTINRVL RASSTASDRP ALFAAQFSLS HLCWLITYPL
TGWVGATVGF TAAWSLLMGL VLVAGLAATW LWPARLLETF RHQHGADTDH EHLDDAEWDG
AAWVHTHRVQ IDGNHTRWPQ PV
|
|---|
| |