Gene Sare_2613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_2613 
Symbol 
ID5703368 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp2978948 
End bp2979607 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content68% 
IMG OID641272074 
ProductXRE family transcriptional regulator 
Protein accessionYP_001537444 
Protein GI159038191 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.629122 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGCG ACACGAACGA CGTGCTCGAC GCGGTGGGGC CACGACTGCG TGCCCTGCGC 
CGGCACCGTG GCCTCACCCT CGCTGACGTC TCGACGACAA CCGGTGTGTC CGAGAGCACC
CTGTCCCGCC TGGAGGGCGG GCAGCGCCGG GCGACCCTGG AGTTGCTGCT GCCCCTGGCC
CGCATCTACA ACGTTCCGTT GGACGACCTC GTCGGCGCCC CGCGCACCGG TGACCCCCGC
ATCCACCTCA CGCCGATCCG CCGGTTCGGT ATGGCCTTCG TGCCCTTGTC CCGGCGACCC
GGTGGGGTGC AGGCATTCAA AATGATCATT CCAGCCCGGC GAGAACCACT CGAGCCGACC
CCGAAAACCC ATGACGGCTT CGAATGGCTG TACGTGCTCA ACGGGCAGCT GAGACTGATG
CTCGGAGAAC GCGACCTGAC CCTGTCCCCC GGCGAGGCGG CCGAGTTCGA CACGTCGCTA
CCGCACTGGC TGGGCAGCGC GGACGGCGCA GCGGTCGAGC TGCTCATCCT GTTCGACCCG
CAAGGCGTAC GCACACACAT CCACGCCGAC ACGCACCGGC CGCAGCGCGC GACGAGTTCC
AGCGCTGAAC CCGCTGAGGG AACGACGATC AGAGGTACTG GTGCCGCCAA ACGGGAATGA
 
Protein sequence
MDSDTNDVLD AVGPRLRALR RHRGLTLADV STTTGVSEST LSRLEGGQRR ATLELLLPLA 
RIYNVPLDDL VGAPRTGDPR IHLTPIRRFG MAFVPLSRRP GGVQAFKMII PARREPLEPT
PKTHDGFEWL YVLNGQLRLM LGERDLTLSP GEAAEFDTSL PHWLGSADGA AVELLILFDP
QGVRTHIHAD THRPQRATSS SAEPAEGTTI RGTGAAKRE