| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2555 |
|---|
| Symbol | |
|---|
| ID | 5706409 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 2910629 |
|---|
| End bp | 2911501 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641272018 |
|---|
| Product | pentapeptide repeat-containing protein |
|---|
| Protein accession | YP_001537388 |
|---|
| Protein GI | 159038135 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1357] Uncharacterized low-complexity proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00000219025 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGACAGAGG TCGGTCCGGA GGACCTACGC GCCGACTGTT CCCGATGCGT GGGGCTCTGT
TGCGTCGCTC CGGCGTTCGC CGCCTCGGCC GACTTCGCGG TCGACAAGCC GGCCGGACAG
CCGTGCCCGA ACCTGCGCCC GGACTTTCGC TGCGGAATCC ACACCGACCT GCGGAACCGG
GGCTTTCCCG GCTGTACCAC CTTCGACTGC TTCGGCGCCG GCCAACGCGT GACGCGGAAC
GCCTCTGGTG GACGAAACTG GCGAAACGAC TCAACTACCG CCCAGGCCAT GTTCGACACC
TTCGCCGTGG TGCGGCCGTT GCACGAACTG CTCTGGCACC TGACCGAGGC ACTCACGCTG
GATCTGCCCG CATCGCTGCG GGTCGCCCTG ACCGAGGCAC TCACCGACAC CGACCAGGTG
GCCGGTGGCG ACCCGGAGTC GGTGCGGGCG CTGGCCGTCG ACGCGCACCG CGGCAGAGTC
GTTCCGCTGC TGTCCCGGGC CGGTGACCAT GCCCGTGCCC GCAGTGGCCG GCCCGGCACG
GACCTGCGCG GCGCCGCTCT TCTCGGCACC GACCTGCGCC GAACCGACGT ACGGCGAGCG
ACCCTGCGCG GTGCTCAGCT GGTCGGCGCC GACCTTCGGG GGGTCGACCT GACCGGCGCG
GATCTGGCGG GTGCCGACCT GCGCGGCGCC GACCTGCGCG GCGCGAATCT GACGGCTGCC
CTCTTCGTGC ACCAGGCCCA GCTGGACGCG GCCCGAGGTG ACCGGGCCAC CCGCCTACCG
CCGGGACGCA GCCGACCCGA CCACTGGGCC GCGCCTGCAT CGGCCCCGGT CCGGCCCCGG
CCACCTGCCC GTGGGCTGGG CCGCCGCCGC TGA
|
|---|
| Protein sequence | MTEVGPEDLR ADCSRCVGLC CVAPAFAASA DFAVDKPAGQ PCPNLRPDFR CGIHTDLRNR
GFPGCTTFDC FGAGQRVTRN ASGGRNWRND STTAQAMFDT FAVVRPLHEL LWHLTEALTL
DLPASLRVAL TEALTDTDQV AGGDPESVRA LAVDAHRGRV VPLLSRAGDH ARARSGRPGT
DLRGAALLGT DLRRTDVRRA TLRGAQLVGA DLRGVDLTGA DLAGADLRGA DLRGANLTAA
LFVHQAQLDA ARGDRATRLP PGRSRPDHWA APASAPVRPR PPARGLGRRR
|
|---|
| |