Gene Sare_2362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_2362 
Symbol 
ID5704994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp2717175 
End bp2717996 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content69% 
IMG OID641271840 
Product20S proteasome A and B subunits 
Protein accessionYP_001537211 
Protein GI159037958 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0638] 20S proteasome, alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.674548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0478454 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCATGC AGTTTTACGC CTCGCCCGAG CAGATCATGC GTGACCGCTC CGAGCTGGCC 
CGTAAGGGCA TCGCCCGGGG ACGCAGCGCG GTGGTCCTGA GTTATGCCGG TGGGGTGCTC
TTCGTCGCGG AGAACCTCTC CAGTGCGCTA CACAAGGTCG GCGAGATCTA CGACCGGATC
GGCTTCGCCG CGGTGGGCAG GTACAACGAG TTCGAGAACC TGCGGCGTGC GGGCGTGCGG
ATGGCTGACC TGAACGGCTT GAGCTACGAC CGGCGGGACG TGACCGGCCG GGCGCTCGCC
AACGCGTTCG CACAGACCCT TGGCGCAATC TTCACCGAGC AGTCCAAACC GTTCGAGGTG
GAGATCTGTG TCGCCCAGGT CGGAGCGACG ACAGCGGACG ACGAGTTGTA CCGACTCACC
TACGACGGGT CGGTCAATGA CGAGCCAGGT CGAATGGCGA TGGGCGGTCA GGCCGAGGCG
ATCACCGGGG TGCTCAAGTC AAACCACCGT CCGGACATGT CGCTGGGCGA CGCGGTAAAG
GTGGCGGTGC AGGCGTTGGG CAGTGTCGGC GGTGAGGGTG GGGCTGCCCG CACGATCGCG
GCGGACCAAC TGGAGGTCGC CGTCCTGGAC CGTGGCCGGG TGGGGCGGAC GTTCCGGCGG
GTTACCGGCG CCGCGTTGAC CGTGCTGCTC GACGACGGTG CGGCCGGGCA GCCTCCGTCG
TCATCGGACA CGGACACCTC GGCGGCGGAG GCGCGGAAGC CGACGGCGTC GGCGGGCTCG
GCGGACCTGG AGGGCCCGGA GCCGGAACGC CCGGATTCCT GA
 
Protein sequence
MAMQFYASPE QIMRDRSELA RKGIARGRSA VVLSYAGGVL FVAENLSSAL HKVGEIYDRI 
GFAAVGRYNE FENLRRAGVR MADLNGLSYD RRDVTGRALA NAFAQTLGAI FTEQSKPFEV
EICVAQVGAT TADDELYRLT YDGSVNDEPG RMAMGGQAEA ITGVLKSNHR PDMSLGDAVK
VAVQALGSVG GEGGAARTIA ADQLEVAVLD RGRVGRTFRR VTGAALTVLL DDGAAGQPPS
SSDTDTSAAE ARKPTASAGS ADLEGPEPER PDS