Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_2158 |
Symbol | |
ID | 5705614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2481792 |
End bp | 2483177 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641271643 |
Product | amino acid permease-associated region |
Protein accession | YP_001537014 |
Protein GI | 159037761 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00661311 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTGATA CACCGTCCGT GCCGGCTGTC GGCGGCCGGC TGACCGTCGC GCAGGGCACC GCGCTGTATG TCGGCGCCGT CCTGGGGACC GGAGTCATCG CTCTTCCCGC GCTGGCGGCC GAGGCCGCCG GACCCGCCTC ACTGCTGGCC TGGCTGCTGC TCGTGGTCGT GTCCGCCCCG CTCGCGGCGA CCTTCGCCGC GCTCGGCTCC CGCTACCCGG ACGCGGGCGG CGTGTCGACG TATTCCCGGA TGGCCTTCGG GCCACGGGCC GCGGCCGTCG TGGGATGGTG TTTCTACTTC GCGGTGCCGC CCGGTGCCGC CGCGGCTGCG CTCTTCGGTG GCGCGTACGT GGAGGCCGCT GTCGGTGGTG GCGACCTCAC CGTGGCGGTC ACGGCCGTTC TCCTCATGGT CGTGGTCACC GCCACCAACT TCTTCGGGGT TCAACTCGCC GGGAGGGTGC AGCTCGCGTT GGCCGGTGTC CTGGTCACGT TCCTGCTCGT GTCCGTGGTC CTGTCGCTAC CCCACGCCTC CGCCGGCAAC TTCGAACCGT TCGCCCCGCA CGGCTGGACG GCGATCGGTC CCGCTGCCGC GTTGCTGGTG TGGAGCTTCG TCGGCTGGGA GGCGATCACG CACCTGACCG CGGAGTTCCG CCGCCCTGCC CGGGACCTGC CGCGGGCCAC CGCGGCGGCG GTCATCGTGG TCGGCGCGTT GTACCTCGCG GTCGCCTTCG CCATCATCGC GGTACTCGGG TCGTCCGCCG CCACCGCCGA CGCGCCGTTG GGCGAGTTGT TCGCCGTCGC GCTCGGCGGC GACGCCCGGT GGCTCGCCGC CGCCGCCGCG CTGCTGCTCA CCTTCGGCGC GATGAACGCG TACTACGCCG GCGCGGCGAA GCTCGGCGCG GCGCTTGGCC GGGATGGTGC CCTGCCCGTC TGGCTCACCA GAGGGACCGT GGCCGGCGAG GTGCCGCGGC GTAGCCTGGC CATCAACGCG GCGCTGTCCT TCCTGGCCCT GTTCGCGGTG CTCGCCGCTG GTGTCGGCCC TCGTCCGCTG GTCCTGCTGA CCACCGGATC ATTCGTCACG GTCTACGCCG TGGGGGTCGC GGCGGCACTG CGGCTGCTAC CGTCGCGCAG CAAGACCTGG TGGGCGGCTG TGGTGACGGT CGGAGCGGTG CTGTTCCTGT TGATCATGAC CGGTGTCTAC CTGGTGTGGC CCCTGGTCGT CACGGGCGCG GCCCTGCTCT ACCTCCGGTT GCGCACTGAC CGCAACGGCG GGGGGAGGCA GCGTCCACCG GGCGCGGTTC CCGGCCAGGT GGCCGAAACC AGGGACACCG CCACCGAGGC GCCGGAGGTG GCGACGACCC CGGATGGTGA GCACTCCGGG CGTTGA
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Protein sequence | MADTPSVPAV GGRLTVAQGT ALYVGAVLGT GVIALPALAA EAAGPASLLA WLLLVVVSAP LAATFAALGS RYPDAGGVST YSRMAFGPRA AAVVGWCFYF AVPPGAAAAA LFGGAYVEAA VGGGDLTVAV TAVLLMVVVT ATNFFGVQLA GRVQLALAGV LVTFLLVSVV LSLPHASAGN FEPFAPHGWT AIGPAAALLV WSFVGWEAIT HLTAEFRRPA RDLPRATAAA VIVVGALYLA VAFAIIAVLG SSAATADAPL GELFAVALGG DARWLAAAAA LLLTFGAMNA YYAGAAKLGA ALGRDGALPV WLTRGTVAGE VPRRSLAINA ALSFLALFAV LAAGVGPRPL VLLTTGSFVT VYAVGVAAAL RLLPSRSKTW WAAVVTVGAV LFLLIMTGVY LVWPLVVTGA ALLYLRLRTD RNGGGRQRPP GAVPGQVAET RDTATEAPEV ATTPDGEHSG R
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