Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1939 |
Symbol | |
ID | 5705758 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2234998 |
End bp | 2237100 |
Gene Length | 2103 bp |
Protein Length | 700 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641271444 |
Product | NERD domain-containing protein |
Protein accession | YP_001536815 |
Protein GI | 159037562 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00843241 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCTGCTG GTGGGTCCGC ATCCGCGCAA GCCGCCCGGC ACCGTGAGCA CGCGCAGTTC CTTACCCGTC AGCTTCGTGA AGCGCATCGG GCCGCCGCTC GGTGGAGCGC AGCGGCGGCC GGGGAACGGC AGGTCGCAGC TGCGTTGTGG GCGCTGACCG GTTCGGGCTG GACGCTTTTG GTTGATCGGC GGTGGCCCGG TACCGCGACG GCAAACGTCG ACATGATTCT CGTCGGTCCT GCCGGCGTGT ACGTCATCGA CGTCAAGAAC TGGCGCGACG CCCCGCAGAT TGTCGACGGC GAACTCATCG CCGCGAACCG CTCGTGTACC TCCGAGGCGG TGAAGCTGCA AGCGGTGACG CGCCGCGTTG AGGACGCCCT GGCCGACATG CAGATGTCAC CCGTGGCCGT CGCACCGGTC ATGGTCTTCG TCGGGCGGCA GGTCGATGAA CGGCTCGGCC GTGTCCACCT CGTCGGCATC CACGAACTGC TGCACACCGT CACCAGCGCC CGAACTCGCC TGCGACCTCC GGTGGTCCGC GCGGTGGCGG CTCACCTGAC CGATGTATTT CCGGCCTACG AGGCACCCCA GCTACCCGAC ACCGCCACGA CCGACGCCCC GGCGAGCACT CGGGACGAGC CTGGCGAGCT CTTCGATGTG GACGACCTCG CTGCCGAACA GCTACGCGCT GCGCGGGAGC GGCCGGTCGA GAGTTGGATG ACGTTCCTGC ACCCCGACCA GCTCAGCCTG GTGCGTCGCC GGTGGGGCGG CCCGGCGCGG ATCACCGGCG CCGCCGGCAC CGGCAAGACA GTCGTCGGGC TTCACCGGGC CGCCTACCTG GCCCAGTCCG GCGGGCGAGT GCTGTACGTC ACCTTCGTCC GCAACCTGCC GCTGATACAG AAACACCTAC TCGAACGGAT GGCGCCCGCT GGCAGCGACC GGATCGAGTT CACCAGCCTG CACCGATGGG CAGTCACCCT CCTGGCACAA CGGGGAATTC CGTCCCGCCT CAACGTCGCC AAAGCCGATG ACTGCTTCGC CCGCGCCTGG CGCACCCACG GCCGACACAC CTGCCTCGCC GACCTCGAGC CCAGCCCCCG CTACTGGGAA GACGAGCTCC GCCACGTCAT CAAAGGCCGC GACATCTCCA GCCTGCCCAA ATACCTCGCC GCATCGCGAC CGGGCCGACG AACCGCCCTC CGCAAGGCAC ACAAGGAAGC AGTATGGGCG CTGTACGAGG AATACCAGCG GCTACTGAAC GAACGCGGCG TCCAGGACTT CCCCGACCTG CTGCTCACCG CCCTCGCGGA ACTGCGTCGC CACCCCACCG ACGGCGGATA CACCACGGTC ATCGCCGACG AGGTGCAGGA CCTCACCCTC ACCGGGGTCC GGATCCTGCA CGCCATCGCC GGCGACAGCC CTAACGGTCT GCTGCTCATC GGCGACGCCC AACAAGCGGT CTACCCCGGC GGCTTCCGCC TCGCCGACGC CGGCATCAAC ATCCGAGGCG GCCGCGCCGA GGTCCTCCAC GTCAACTACC GCAACGCGGC CGCCATCATG CAGGCCGCAC TGAACGTTCT CGACGGTGAA CCGTTCGACG ACATCGACGG CATGACGATC ACCGCCCCAC CGGCCGTCGA GATGACCTAC CACGACGGCC GAGTCGTTCA CTCGCCCGCA GATTCCCGCC CCATGCACGA CGCAGCGCTC CGCAAGGCAC TGAACGATCT CGCTGCGCAG TCCGACAACG CGTTGGCTGA CGCGGCCGTG CTGTGCGCCA CCAAACGCGA CGTCGACCAC TATCTCCAGA TGCTCAGAGC TCAAGGGCTA CCGGTGCTGA ACCTCGATGA CTACGACGGC CGCCCAGGCC AGGCACTGAA AGTCGGCACA TACCTACGAG CCAAGGGCCT TGAGTTCAAG AACGTATACC TACCCTGCCA TGATCGAGGG CTCAAAGCCG CGCAACTGGG CGGATCCGCC GATGTGGACC GGCTCGCTCT TGCCCGCCGG CAACTATTCG TCGCGATGAC CCGCGCACGG GACCTGCTGT GGCTCGGCTC GATCACCGAC GGCGCTCCCG CCACATCGAT GAACGGGTGC TGA
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Protein sequence | MAAGGSASAQ AARHREHAQF LTRQLREAHR AAARWSAAAA GERQVAAALW ALTGSGWTLL VDRRWPGTAT ANVDMILVGP AGVYVIDVKN WRDAPQIVDG ELIAANRSCT SEAVKLQAVT RRVEDALADM QMSPVAVAPV MVFVGRQVDE RLGRVHLVGI HELLHTVTSA RTRLRPPVVR AVAAHLTDVF PAYEAPQLPD TATTDAPAST RDEPGELFDV DDLAAEQLRA ARERPVESWM TFLHPDQLSL VRRRWGGPAR ITGAAGTGKT VVGLHRAAYL AQSGGRVLYV TFVRNLPLIQ KHLLERMAPA GSDRIEFTSL HRWAVTLLAQ RGIPSRLNVA KADDCFARAW RTHGRHTCLA DLEPSPRYWE DELRHVIKGR DISSLPKYLA ASRPGRRTAL RKAHKEAVWA LYEEYQRLLN ERGVQDFPDL LLTALAELRR HPTDGGYTTV IADEVQDLTL TGVRILHAIA GDSPNGLLLI GDAQQAVYPG GFRLADAGIN IRGGRAEVLH VNYRNAAAIM QAALNVLDGE PFDDIDGMTI TAPPAVEMTY HDGRVVHSPA DSRPMHDAAL RKALNDLAAQ SDNALADAAV LCATKRDVDH YLQMLRAQGL PVLNLDDYDG RPGQALKVGT YLRAKGLEFK NVYLPCHDRG LKAAQLGGSA DVDRLALARR QLFVAMTRAR DLLWLGSITD GAPATSMNGC
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