Gene Sare_1573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1573 
Symbol 
ID5707518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1806865 
End bp1807560 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content67% 
IMG OID641271085 
Producthydrolase 
Protein accessionYP_001536460 
Protein GI159037207 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00282427 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGCCG ACCTTGACCG GCTGCTTGCC GAGGTTGGCG CCGTGCTGCT CGACTTCGAC 
GGGCCGGTGT GCAGCGTGTT TACGGGCTAC CCCGCACCGC AGGTTGCCGC CGAGTTGGTC
AACATGCTGC ACCGACGCGG CATCGAGTTA CCGCCCGATC TGGTCAGCGA GCCGGATCCG
CTTGAGGTAC TACGCCACAT TGGCGCGGTG GGCGACCACG GCATCACGCG GGCGGTAGAG
GACGCACTCT GCGCAGCCGA GCGCCAGGCC GTCGAGAGCG CCGAACCGAC GCCGTACGGC
CGAGAGGTCA TCGTGGCTGC CCGGCAGGCC GGGATGTCGG TGGCAGTGGT CAGCAACAAC
TCGGCCGGTG CAGTGAGCGC TTACCTCACG GCGCACCGGC TCGCTGGGTA CATCTCCCCA
GTGGTCGGCC GGGCGTACGC CGACCCCGCT TGTATGAAGC CCAACCCTGG ACCGATCCTG
CAAGCCGTGT ACGCCGTAGG TGAGCCGCCG AGCCGGTGCG TGCTGGTCGG CGACTCGCTC
ACGGACATCG ACGGAGCACG AGCGGCCGGA GTGCGAGTGA TCGGGTACGC GAACCGTCCA
GCCAAGGTCG AGAGGTTCCG AGCAGCCGGA GCCGATGTAG TGGTCACCAG CATGCGGAAG
ATTGCTGACG TGTTGGTCGA GCGAATGGAC GCCTGA
 
Protein sequence
MSADLDRLLA EVGAVLLDFD GPVCSVFTGY PAPQVAAELV NMLHRRGIEL PPDLVSEPDP 
LEVLRHIGAV GDHGITRAVE DALCAAERQA VESAEPTPYG REVIVAARQA GMSVAVVSNN
SAGAVSAYLT AHRLAGYISP VVGRAYADPA CMKPNPGPIL QAVYAVGEPP SRCVLVGDSL
TDIDGARAAG VRVIGYANRP AKVERFRAAG ADVVVTSMRK IADVLVERMD A