Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1428 |
Symbol | |
ID | 5704817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 1653783 |
End bp | 1655267 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641270937 |
Product | methyltransferase small |
Protein accession | YP_001536318 |
Protein GI | 159037065 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2890] Methylase of polypeptide chain release factors |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000592634 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGGACCCAC ATGACATGCT GTTCTCCCCC GCCGGCGTGA CGGCGCTGCG CAGCGCCCTC ACCCGGGCGA ACTTCACCTC GAACGGAATC GCCGGCCGGC TGGGGTCGCA GGCGACCGGC GGCATGGCCC GCAACGACTT CCGCGCGGCG CTGCGCGCCA CCGAGGACCG TGACCCCCTC GCCACCCTGA TCCGGCTCTT CGTCTGCGAA CAGACCGAAC CGTACGACGC GGTCGCCACC GCGATCGCGC CGCTGCCGGT CAAGGAGGCG CTCGCCGGTG GCCTGGTCGA GCGGTACGGC GACGGACTGC GGAGGGGCCT CGACCTGGAG CCGTACGGCG ACGACTGGTG GGTACTCGCC GACGTGCCCG CCGGCAGCCA CCCCGGCCGG GCGTTGCCGG CCGAGCATGT GCTCGGCATC GGCGGCGCCA CCCAGACCCT GATCGGGGCG ACCGTTCGGC GGCCCGTCGA GACCGCGCTC GACCTGGGCA CCGGCTCCGG CGTCCAGGCG CTGCACCTGT CCACCCACGC GCGGCGGGTC ACCGCCACCG ACCTCTCCGA GCGGGCGCTG CGGTTCGCGG CGACCGCCGC CGCCCTCAAC GGGCAGGACT GGGAACTGCT TCGCGGTGAC CTGACCGCCC CGGTCGCCGG GCGCCGCTTC GACCTGGTGG TCAGCAACCC GCCGTTCGTC GTCGGACCGG GCACCACCAC ACACGTCTAT CGCGACTCCG GGCGGGTGGG CGACGCGATC GGCGCCGAGC TGGCCGCCGC CGCCCCGGGT CTGCTCACCG AGGGTGGCAC CATGCAGTAT CTCGCGAACT GGGTGCATGT CGCCGGTGAG GACTGGACCG AACGGGTCAC CGGATGGTTC GCCGGCAGCG GGCTGGACGC CTGGGTGATC CAGCGCGAGG TTGCCGACCC GATGGCGTAC GTCAACCTGT GGCTCGCCGA TGTCGGTGAG ACGGCCAGCC CCGAGCGGAT GGCCGAGTGG CTGGACTGGT TCGACGCGCA CAAGGTCGAG GCGATCGGCT TCGGCATCGT CTCGCTGCGC CGCGCCGGGC ACGACGACCC CGTCGTCCGG GTGGAGGAGC TGCGCCAGCT GGTCGAGGCG CCGCTCGGCG ACCGCGTCGC CGACTGGTTC GACCGCCAGG AGTGGCTCCG GGTACGCGAC ACCGACGGTC TACTCGCGGC GCGCTACCGG GCCGCCGACG ACCTCCAGCT ACGGCAGGAG GCCACCATGG GCGACGAGGG GTGGGCGGTC GACCGGCAGG TGCTCGCCAT GCCCCGCGGT CTGCGCTGGA CCGAGGAGAT CGATCCGATC GTTCTCGCTC TGGTGGGCGG GGCGGACGGG CGGTTGCCGC TGCGCGATCA GCTCGCCCTG CTCGCCGCCG CGCACGACGT GGCACCGGGC GAGTTGGCGG AGGCGGCCGG CCCGATCGTG GCTCACCTGG TCGAGCGGGG TTTCGTCGAG CCGGTGGTGG ACTGA
|
Protein sequence | MDPHDMLFSP AGVTALRSAL TRANFTSNGI AGRLGSQATG GMARNDFRAA LRATEDRDPL ATLIRLFVCE QTEPYDAVAT AIAPLPVKEA LAGGLVERYG DGLRRGLDLE PYGDDWWVLA DVPAGSHPGR ALPAEHVLGI GGATQTLIGA TVRRPVETAL DLGTGSGVQA LHLSTHARRV TATDLSERAL RFAATAAALN GQDWELLRGD LTAPVAGRRF DLVVSNPPFV VGPGTTTHVY RDSGRVGDAI GAELAAAAPG LLTEGGTMQY LANWVHVAGE DWTERVTGWF AGSGLDAWVI QREVADPMAY VNLWLADVGE TASPERMAEW LDWFDAHKVE AIGFGIVSLR RAGHDDPVVR VEELRQLVEA PLGDRVADWF DRQEWLRVRD TDGLLAARYR AADDLQLRQE ATMGDEGWAV DRQVLAMPRG LRWTEEIDPI VLALVGGADG RLPLRDQLAL LAAAHDVAPG ELAEAAGPIV AHLVERGFVE PVVD
|
| |