Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0883 |
Symbol | |
ID | 5704239 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 992918 |
End bp | 993517 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641270402 |
Product | NUDIX hydrolase |
Protein accession | YP_001535792 |
Protein GI | 159036539 |
COG category | [L] Replication, recombination and repair [R] General function prediction only |
COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.402979 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0136644 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCGACCC CCACCGTCGG AGACGGCCTT CCAGTCAACA CGGCGTTGCA CACCGACGCC CTCGCCGTGC TGCGCGGCTG GACACCCACC TCGGTGGCCG CCGAGAAGGC CCGGGACCAG ACGCTCGACC TGCTTGCCGA CGGGCCGGTA GCGATGAGCC GGGCACACCG GGCCGGCCAC GTGACCGCAA GCGCGCTGGT GCTCGACGCC ACCGGTTCCC GGGTACTGCT CTGCCTGCAC GGCAAGTTCC GCCGGTGGGT GCAGCTCGGC GGGCACTGCG AGCCCGGGGA TCCGACGCTG GCCGCGGCCG CGCTGCGTGA GGCGACCGAG GAGTCCGGTG TCACCGGCCT CCGGATCGAT CCGGTGCCGA TCGACGTGGA CATCCACCCG GTCACCTGCC AGGGCGGCTC GTTCCACCAC GACGTACGCT TCGCCGTCCT CGCCCCGCCC GGCGCCCGAG CCCGGGTCAG CGACGAATCC GAACAGCTGG GTTGGTTCCC GCCGAACCAG TTGCCGGACC CACTGGCCGG TGGGACCACC CAGCTGATCG CACCGGCACT GGCAGCGCTC AGACGAGCCC CACTTCACCC CGTTCCTTGA
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Protein sequence | MSTPTVGDGL PVNTALHTDA LAVLRGWTPT SVAAEKARDQ TLDLLADGPV AMSRAHRAGH VTASALVLDA TGSRVLLCLH GKFRRWVQLG GHCEPGDPTL AAAALREATE ESGVTGLRID PVPIDVDIHP VTCQGGSFHH DVRFAVLAPP GARARVSDES EQLGWFPPNQ LPDPLAGGTT QLIAPALAAL RRAPLHPVP
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