Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0760 |
Symbol | |
ID | 5708279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 846533 |
End bp | 849979 |
Gene Length | 3447 bp |
Protein Length | 1148 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641270279 |
Product | histidine kinase |
Protein accession | YP_001535670 |
Protein GI | 159036417 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0211999 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCAAAC GACCAAAGAC GGCAGGTTCC ATCCTGTCGC GTCTGCGCCG ACCTGCCGGT CGGCTCCGCG ACATGCCGAT CTGGTCCAAG CTCGGTCTCA TCATGATCGT GCCGACCATC GCCACCGTCG TCGTGGGTAC CAGTGGTCTG GTCGACCACT TGCAGACGCT CAACAACGCC AATCGGTCCG GCGACCTCAC CAACCTGGTC GGCTACTCCG GAGAACTGGT CAGCCAACTG CAGGACGAGC GGACGGCGGC GATCCGGCTG CTCGGTGAGA GACGGTCGGC GCAGCGGGAG GAACGCCGCG CGGCGTACGA GGACGTAGCC GCCCGCGTCG ACAAGGCCAA GGAGCCGTAT TCCGCGCAGC GGGGCGACCT TGACGGCCTG CCCAGCACCC TCGACAACCA GCTCCGCTTC ATCGACAAGA CCCTCACCGA CCTGCCCGGC ACGCGAAGTC AGGTCCTCAA TGGTCGGCTG AGCCTCACCC AGGCGCAGCA GCAGTACGAG GCCCTGCTGA CCGATCTGAT CAACGTGCGG GATTCGGCTA CCCAGCTGGC CGGTGATTCC GAGCTGAGTG ACCGAATGCG CGCCGCGACC GCCCTCGCCC GGAACAAGGA GTACCTGTCC CAACAGCGAG ACGTGGTGCA CGTCGGCCTC ATCCGGGGGC AGCTCACCCC TGATCTGCGT AACACCTACA TCTCCACCTT CACCGGCCAG CGGCAGTGGC TGGAAACCTT CGCCGCGGTC GCCTCCCGTG CCGACCAGGA GCTGTACGAC CAAACCGTCG CCGGTCCCGA TGCCCGGGAG GCGGTGGCCT ACAACAGCAA CCTGCGCGGC CTCTCCGACG CCCGGACCCT CGACAGCATC GGCTTCACAG CCGACCAGTG GGACAACGCG ATGGTCGGGT ATGCCGCTCT TGTCCGCGAG GTGGAAGGAA AGATCGACGG TGACGCCGTC CGCCTCGCCG ACGCTCTCCG GTCGGACGTG CGGCTGCAGG TGTCCCTGGA GACCGGGCTG CTGCTCAGCA TGCTGCTGCT GTCCATTCTC TTCGCGTTCC TGGTCGCCCG CTCGATGGCC CGGTCGCTGG CCGACCTCCG GATGGGCGCC CTGTCGATCG CGGAGCACGG GCTGCCGCAT GCCGTCACCC GGCTGCGTGC GTCACAGGCC ACCGGCGGAC AGCTCAGCCC CAAACAGCTG GCTGACCAGA TCGCCGAGCC GCTGCCGGTG CGCAGCCGGG ACGAGTTCGG TCAGGTGACC GAGGCGTTCA ACGCGGTGCA CCTGGAGGCA GTGCGTACCG CGGCTGAGCA GGCCGCCCTG AGAGCCTCCG TGGCGACCAT GTTCGTCAAC CTGGCCCGTC GGTCCCAGAT TCTGGTCGAC CGGCTGATCG GCCACCTCGA CCGGCTCGAG CGGGGCGAGG AAGACCCGGA CCGGCTGGCC GAGCTGTTCC AGCTCGACCA TCTCGCCACC CGGATGCGTC GCAACGACGA AAACCTGTTG GTTCTCGCTG CGGCTGACTC CACCCGCGTA CAGCGGGAGC CGGCCGCCCT GATCGACGTG CTCCGGGCCG CCCAGTCCGA GGTCGAGCAC TACACGCGGA TCGAGTTCGG CGTGATCGAC CGGGACATCG AGGTCGCGGC CCACGCCGTC AACGACCTGG TCCACCTCGT CGCCGAGCTG TTCGACAACG CGACGGCGTT CTCGCCGCCC GAGTCGCAGG TCGTCGTCGA GGCCCGTCGC GTCGGCGAAC GTGCCTCCCT CTACGTGGAG GACCGCGGCA TCGGCATCAG TCCGGAACAG CTACGGGAAC TGAACGAGAA GCTCGCCATG CCGCCGCAGG TGGACGTGGC GGTGTCCCGG ATGATGGGTC TGGTCGTGGT CGCCCGGCTG GCGTCCCGGC ATGGTGTGAA GGTGGAACTG CGCCCGGGCG CCGACCGGGG GACCGTCGCG GACGTGACCC TGCCGGTCAC CCTGTTGGTG CCCCGGGCGC TCGCCAGCCG GCCTCAGCTG CCCCCCGGCC TGCCGCCGGT GCCGACCTCG GCGCCGGGTT TCGAGGCCGT GTCCACGCAT GGGAGCACTC CGTCCGGGAC AGCTGCCGGC CCGTACCCAG GTGAGTCCGG TAACCAGGTG ACGCTCGGTG GTCGGCCGTT CGACCCGGGC CACCGCAATG GTGCGGGCGC ACCGATGGGG ACACCGCAGA CGATGCCCGC CTGGTCGGAC CTGGCCGGCA GTGAGCCGCG GGCCCTGTAC GACTCAGGCG CGCAGCCGAG CGGCCCGCTA CCGCAACGGC GGCCCCCGGG CGAGGCGGAC GCCGGGCAGC AGCCCGGGAT TCCGCGGCAA CTGTCGAGCA GCCCGGAGGC CCAGCCGTAC GCCCCGCCGG CGACCCCATA CTCCGGGTGG TCTGTCACCA GCCCGCCGAC CTCGGGCGTA CCGACCTCCG CGCCTCCGGT GTCGGCTGCC CCGACGTCTG GGACGCCGAT CTCCGCGGCA CCGGCTTCCG GCCAGCCGTA CGCGGCGCCG CTACCGCAGC GTTCGGCCCC CACGGCCCCG CCGGCCTGGC CGCCCGTACC CGCTGGGGCG GGGGACACCG CCGCCCCGTC GCAGTCGGAA TGGGTCGCTG CGGCCCCGGA CCTGACCACC GAGTTGCCTC GGGTGGCGCG TCCGGCGGGG CCGCCGCCTG TCGGGCCTCC GGCGGCCCCG GTGCAGGGCG GCCCAGCCGT TCCGGTGTCG GGCAACCCGC CGACGTCGGC TCCGGCCACG CCACCTGCCC AGCACCAGCA GCCGCATGCG GACGAGACAA TGGAGCTGCC GATCTTCCGG GAGTTGGAGT CGGCCTGGTT CCGCACTCGC CGACCTGGTC CGGAGGAGAC TGCCAGTCGG GCCGAAGCTA CCCAGCCCGG CGGTGTCGCT GGGCCGGGTG GCGCCGCGAC CCAGCAGTTC GCCAGGGTCG ACGCGGACAC CCAGCAGCAG ATACCACCCG CAACGACAGG TAACACACCA ATGGCAGAGA CCCCGGCCAC CGGCGGCACA CCGCCTCAGC ACGGCTTGAC GGCCAACGGG AGCGTTACCC CCACCGTGGG CGGATTCGTC CAGCGGCGGG GGCGAGCTGG TGAAGGCTGG CGAACCGCCG CCGACGATGG TTGGCGGGCC GCCTCGGCAG CAAGCGACGT GCAGGTGGCG GCGACCACCT CGACGGGGCT GCCCAAACGT ACCCCGATGG CGCAGCTGGT ACCGGGCGCC GTGGAGAAGC CGTCCGCAGC GGTCCAGCGG CGTACGCCCG AGTCAGTCCG AGGGCTACTC TCCGCCTACC ACCGTGGGGT TCAGCGCGGA CGAAGGAACC CCACGGACAG CAACCCGACC AACCCGGAGG AGACTCCGGG ATGGCAGTCC TCGCAGTCTG GCTCAGGCCC GGTGGCCGGG AGCGGGCAGA AGGAGCAAGA AGGATGA
|
Protein sequence | MSKRPKTAGS ILSRLRRPAG RLRDMPIWSK LGLIMIVPTI ATVVVGTSGL VDHLQTLNNA NRSGDLTNLV GYSGELVSQL QDERTAAIRL LGERRSAQRE ERRAAYEDVA ARVDKAKEPY SAQRGDLDGL PSTLDNQLRF IDKTLTDLPG TRSQVLNGRL SLTQAQQQYE ALLTDLINVR DSATQLAGDS ELSDRMRAAT ALARNKEYLS QQRDVVHVGL IRGQLTPDLR NTYISTFTGQ RQWLETFAAV ASRADQELYD QTVAGPDARE AVAYNSNLRG LSDARTLDSI GFTADQWDNA MVGYAALVRE VEGKIDGDAV RLADALRSDV RLQVSLETGL LLSMLLLSIL FAFLVARSMA RSLADLRMGA LSIAEHGLPH AVTRLRASQA TGGQLSPKQL ADQIAEPLPV RSRDEFGQVT EAFNAVHLEA VRTAAEQAAL RASVATMFVN LARRSQILVD RLIGHLDRLE RGEEDPDRLA ELFQLDHLAT RMRRNDENLL VLAAADSTRV QREPAALIDV LRAAQSEVEH YTRIEFGVID RDIEVAAHAV NDLVHLVAEL FDNATAFSPP ESQVVVEARR VGERASLYVE DRGIGISPEQ LRELNEKLAM PPQVDVAVSR MMGLVVVARL ASRHGVKVEL RPGADRGTVA DVTLPVTLLV PRALASRPQL PPGLPPVPTS APGFEAVSTH GSTPSGTAAG PYPGESGNQV TLGGRPFDPG HRNGAGAPMG TPQTMPAWSD LAGSEPRALY DSGAQPSGPL PQRRPPGEAD AGQQPGIPRQ LSSSPEAQPY APPATPYSGW SVTSPPTSGV PTSAPPVSAA PTSGTPISAA PASGQPYAAP LPQRSAPTAP PAWPPVPAGA GDTAAPSQSE WVAAAPDLTT ELPRVARPAG PPPVGPPAAP VQGGPAVPVS GNPPTSAPAT PPAQHQQPHA DETMELPIFR ELESAWFRTR RPGPEETASR AEATQPGGVA GPGGAATQQF ARVDADTQQQ IPPATTGNTP MAETPATGGT PPQHGLTANG SVTPTVGGFV QRRGRAGEGW RTAADDGWRA ASAASDVQVA ATTSTGLPKR TPMAQLVPGA VEKPSAAVQR RTPESVRGLL SAYHRGVQRG RRNPTDSNPT NPEETPGWQS SQSGSGPVAG SGQKEQEG
|
| |