| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0508 |
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| Symbol | |
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| ID | 5705526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 577868 |
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| End bp | 578446 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641270034 |
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| Product | 2'-5' RNA ligase |
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| Protein accession | YP_001535428 |
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| Protein GI | 159036175 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1514] 2'-5' RNA ligase |
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| TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.170013 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00665931 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | GTGAGACTCT TCGTTGCCCT CTACCCGCCG CCTGAGGCGG TCGACCACCT CAACGCGCAG
GTGGCCCGGC TGCGGGTCGG CGAAGCAGCT GCCGACGGCG TCGGCGTCCG CGTCGCGGAC
GCCGCTCAGG CACATGTCAC GCTCGCCTTT CTGGCAGCGG TGCCCACAGA GCAGCTGATG
GCCGTGGAAG GATCCCTCGA CCAGGTAGCG CGGTGGTCCC GCGACTCGTG GCCGGCCCCG
CCCAGACTCC GTCTGGGCGG GGGCGGGACA TTCGGGCAGG GCCGTTCCAC CGTCCTGTGG
GTGGGCCTGC GGGGTGACCT GGCGGAGCTG ACCGAGCTGG GCCAGGTCGT CCGGTCCCGG
CTGCGGGCCA ACCGCCTGCC CTACGACGAG AAGCCGTGGC ATCCGCACCT GACCGTAGCC
CGGCCCGGCG ACCGACTACC ACCGGCTGAC GTGGCGGCCG ACGTCGCGGC CTTGGATGCC
TATGGTGGCC CGCAGTGGCC GGCGAGGGAA CTGGTGCTGA CGCGCAGCCA CCCGGGCCAC
CGCCCCACCC ATGACCGCCT GGCCGCCTGG CCGTTGTGA
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| Protein sequence | MRLFVALYPP PEAVDHLNAQ VARLRVGEAA ADGVGVRVAD AAQAHVTLAF LAAVPTEQLM
AVEGSLDQVA RWSRDSWPAP PRLRLGGGGT FGQGRSTVLW VGLRGDLAEL TELGQVVRSR
LRANRLPYDE KPWHPHLTVA RPGDRLPPAD VAADVAALDA YGGPQWPARE LVLTRSHPGH
RPTHDRLAAW PL
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