| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0348 |
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| Symbol | |
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| ID | 5708020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 387564 |
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| End bp | 390491 |
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| Gene Length | 2928 bp |
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| Protein Length | 975 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641269874 |
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| Product | LuxR family transcriptional regulator |
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| Protein accession | YP_001535269 |
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| Protein GI | 159036016 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3899] Predicted ATPase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0210125 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGCACC TTTCGGCGAG TCTGGTCGGA CGGGACAATG TGCTGCAGGA CTTGGCCGGC
GTATTGACCG CTGCCAGAAC GGGCCGCGGT ACTGCGGTGT TTCTGGCCGG CGAGAGCGGC
ATCGGCAAGT CACGGTTGAC CGCAGCCATC ACCGAGCTTG CCTACACCTC GGGCATGAGC
CTGATGCGCG GGCGGGCTAG CGCCATCGGC CCCACTCCGC CGTTTCGACC GCTCACCGAG
GCGGTGTTGT CGCACCTGCG CGTCGACCCC GTCGAGCCCG CGAAACTGGG GCCGTACGGT
CCGATCCTGG GCCGGCTGGT GCCGGAGTGG AGCCTCCCGG AGAGCAGCCG TGATGACGAG
TCGCTGGTGG TGCTGGCCGA GGCCGTGCTG AGGTTGACCG GGCTTGTCGG GCGGGACCGG
GGCTGCCTGC TCAGCCTCGA TGACCTGCAT GACGCCGATC CGGAGACCCT GGCGGTACTC
GAATACCTGG TCGACAACGT CGAGTTGCAG CCGATGATGC TGCTGGGCGC CCTCCGCGAC
GAGGGGCCGG CGATGTCGAT GGTCCGCGCC GCCGCCCGAC GCGGCGCCTG TCAGCTCATC
GACCTGGACC GGCTGTCCCG CGCGGAGCTC GCCCAGTTGG CCGGGGCATG CCTGGATGTT
GAGCCCGACC TGGTCCCGGC CTCGGCCGTT GACCTGCTGT GGGCGGGAAG CTCCGGGAAC
CCGCTGGTCG CCGAGGAACT CATCAGCACG ATGGTCGACG AGGGCATCCT GGTCGGCGAC
GAGCACGGAT GGCAGGTCAG CGGCTACCCC GAGGCATCAA TGTCCGCAGG GCTCGCCTGC
CCGCTCAGTC GCCGCGTCGC CCAGCTCGGG GCGCGCGCCC GCGAGCTGCT GTCGGTCGCC
GCGGTTTTCG GGCAGCAGTT CCCGCTCAAT GTCATTCAGC ACGTCACCGG GCTGGCCGAC
CGGGACCTGC TGGGCCTTCT GCAGAACGAC GTCGCGGGTC GGCTGGTCGC GCCGGATGAG
CAAGCCGCCG ACTGGTACGC CTTCCACCAC CAGCTCAGCC GCGAGGCCGT GCTCGCCCAG
CTTGACCGGG ACGAACACGC GCGGCTCGCG GGCGCACTGG CCACCGCGGT CGAAGCCATC
CATCCAGGAC TTCCGCGAGA GTGGTGCGAG GCCGCCGCGC GGTTGCGGGT GGACGCCGGG
GACCGAGCCA CCGCCGGAAC GCTTTTCACC GAGGCGGGGC GGCGTGCGCT GGCACTGGGC
GCGGCCAACT CGGCCGTCGC GGTGCTGGAC AGGGCATTGG AGTACCTGCC GCACGACGAC
GTGGCAACCC GCGCCGGCAC GTTGGAGCTG CTGCTGCAAG CGCTGGCCGA AGCGGGACTG
GTCGAGCGGG CACTCGCGTC GGTCAGCGAG TTGGACCAGG CCGGCGGGCT CGGCCCGCGC
CGGCGGGCGG CGCTACACAC CCGGCTGGCC TGGGCGGCGA CGATCGCTGG GCGCACCGAG
GACGGGCTAG CCCAGGTGGA GACCGCGCGA GCGCTGCTGG GTTCGGAGGG CTCGGCCGAG
GATCTGGCGC CGATCGACGT TGTGGCCGCG CACCTGTTGT TGGACGCCGC CGGCCCGGAC
CAACTCGCTG CCGCCGAGAG GCTCGCCCGG CAGGCCGCGG AGGTGGCAGA GTCCGCGCCG
CTGCCAGTCG TAGCCTGCCA AGCCTGGCAG CTGGTCGGCG GACTCGCTCG CCACCGTGAC
CCGCAGGAGG CGACCTCCTT CCTGGAGCGA GCACGCACCC TGGCGGTTCG CCACGGCCTG
CCCATCTGCG AAATCCACAC GTTGATCCGC TTGGGCAACG ACGACGCGTT GCGCGTCGGC
GACCTCACCC GACTCGAGCG GGCCCGCGCG CAGGCGACCC AGATGGGCGC GGTGACCGCG
CAGTACCAGG CGGAGGCGAG CATCGCGCTG CACACCGTCC TGCACGGTGA CCTCGCCGCA
GCCGCCTCGC TCACCGACCA GGTCCTTGCG GCGACGACCC GGCTGAAGCT GCTGGAGACA
ACGCAGTACG TGCTGCTGAC CCGCGCGGTA CTCGCGGGAC ACCGAGGCGA CCGCCACCAG
ATGGAGGCGG AGCTGGCCGG CTTCGAGCAG TGGGGTGGGG ACCTGACGTT GCACGCGCCA
CGGGCGTACG GGCTGGCGGC GGCATTCTGT GCGCTGCTGG AGGAGGATCT GCCGAGAGCA
CGGGCGGATC TCGCGCGGGC GGTCGCTGCC GAGGAGCACG GGTCGAGCGT GTACTTCCTG
TCCGGGCGGC ATGGGTTGCA CGTGTTGCTG CAGGCTCTCG CCGGCCAGGC GGAGTGGCCC
GATCTCGAGG CGGTGGCGGT CAACCCGGCG AGCACACTGC GCTGGGATAG GCAGTTCACG
TTCTTCGCCC ACGCGGTCCT CCACGGCCGA TCGGGTCACC ACGACCGCGC TGCCAAGGCC
ATGACGGATG CGCTGGCGGC TGGTGAACCG TACGAGACGA GCCGGCACCT GGGTCTGCGC
CTGGTCAGCG AGGCAGCGCT GACCGATGGC TGGGGTGAAC CGGTGTCATG GCTCCGGATC
GCTGAGGACC ATTTTCACCG CACCGACGTG CCCGCGGTGG CCGGGGCGTG CCGCGCTCTG
CTCCGCAGGG CCGGGGCAAC GGTGCGCCAG CGCCGGGATG GCGCCCAGGG CATTCCGAAC
GAGCTCCGAT CCGCTGGCGT GACGGTGCGC GAGTACGAGG TGCTGGGTCT GGTGGTGAAG
CGCCTGGGAA ACCGTGAGAT CGCCAATCGG CTGCACCTGT CCCCCAGGAC AGTGGAGCGT
CACGTCCACA GCTTGATGAC CAAGACCGGC CTGCCCAACC GGATAGCGCT GGCCGAGTTC
GGCGCCGAGT TCGTCGACAG CCCCCACGCG GCGACGTCAG GGGATTGA
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| Protein sequence | MRHLSASLVG RDNVLQDLAG VLTAARTGRG TAVFLAGESG IGKSRLTAAI TELAYTSGMS
LMRGRASAIG PTPPFRPLTE AVLSHLRVDP VEPAKLGPYG PILGRLVPEW SLPESSRDDE
SLVVLAEAVL RLTGLVGRDR GCLLSLDDLH DADPETLAVL EYLVDNVELQ PMMLLGALRD
EGPAMSMVRA AARRGACQLI DLDRLSRAEL AQLAGACLDV EPDLVPASAV DLLWAGSSGN
PLVAEELIST MVDEGILVGD EHGWQVSGYP EASMSAGLAC PLSRRVAQLG ARARELLSVA
AVFGQQFPLN VIQHVTGLAD RDLLGLLQND VAGRLVAPDE QAADWYAFHH QLSREAVLAQ
LDRDEHARLA GALATAVEAI HPGLPREWCE AAARLRVDAG DRATAGTLFT EAGRRALALG
AANSAVAVLD RALEYLPHDD VATRAGTLEL LLQALAEAGL VERALASVSE LDQAGGLGPR
RRAALHTRLA WAATIAGRTE DGLAQVETAR ALLGSEGSAE DLAPIDVVAA HLLLDAAGPD
QLAAAERLAR QAAEVAESAP LPVVACQAWQ LVGGLARHRD PQEATSFLER ARTLAVRHGL
PICEIHTLIR LGNDDALRVG DLTRLERARA QATQMGAVTA QYQAEASIAL HTVLHGDLAA
AASLTDQVLA ATTRLKLLET TQYVLLTRAV LAGHRGDRHQ MEAELAGFEQ WGGDLTLHAP
RAYGLAAAFC ALLEEDLPRA RADLARAVAA EEHGSSVYFL SGRHGLHVLL QALAGQAEWP
DLEAVAVNPA STLRWDRQFT FFAHAVLHGR SGHHDRAAKA MTDALAAGEP YETSRHLGLR
LVSEAALTDG WGEPVSWLRI AEDHFHRTDV PAVAGACRAL LRRAGATVRQ RRDGAQGIPN
ELRSAGVTVR EYEVLGLVVK RLGNREIANR LHLSPRTVER HVHSLMTKTG LPNRIALAEF
GAEFVDSPHA ATSGD
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