Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0176 |
Symbol | |
ID | 5706333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 188213 |
End bp | 188674 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641269702 |
Product | hypothetical protein |
Protein accession | YP_001535102 |
Protein GI | 159035849 |
COG category | [K] Transcription |
COG ID | [COG1510] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.750866 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00561367 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGGATCCGG AGACCGGCCG GCGCTACGCC GAGGAGGTCG GCGTCGTTCT TGCCCAGATG GGCACCACTC CCGCGTTCGG CAAGCTGCTT GGCTGGTTGC TCGTCTGCGA TCCGCCGAAC CAGACCACCG CACAACTCTG CGAGGCAATG GGGCTGTCCA AGGCATCGGT GTCCACCGGA ATGCGAGTAC TGGAACAGTC CGGCATGGTG CGGCGGGTAC CGAGCCCCGG TCGGGGCCAT GCGTACGAGA TGCACCCGGA TGCCTTCGCC CGTGCCCTCG ACCCAACCGA GAAGATGCGC GTCTTCATCG ACCTGATGCA GCGTGGCATC GATCTGATCG GTGACGCGCA GGCACCCGAG GCGAGCCGGT TACGCCACAC CCGCGACTTC TACGCCTTCA TGATCGAACG CACGCCAGCC CTGATGGAGG AGTTCCGTCG ACAGGAACGA AAGGACACGT GA
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Protein sequence | MDPETGRRYA EEVGVVLAQM GTTPAFGKLL GWLLVCDPPN QTTAQLCEAM GLSKASVSTG MRVLEQSGMV RRVPSPGRGH AYEMHPDAFA RALDPTEKMR VFIDLMQRGI DLIGDAQAPE ASRLRHTRDF YAFMIERTPA LMEEFRRQER KDT
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