| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0174 |
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| Symbol | |
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| ID | 5706331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 185870 |
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| End bp | 187219 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641269700 |
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| Product | ABC-type branched-chain amino acid transport systems periplasmic component-like protein |
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| Protein accession | YP_001535100 |
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| Protein GI | 159035847 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.19527 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00977905 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGATCT CACGCGCCAC GCGAGCTGCC ACCCTGGCCG CCTGCGCGAT GTCCCTGCTC
GCCACCAGCG CCTGCGGGAC CGACCGGTCC GACGAGGCCA CCGCCACCCC GATACGCCTC
TACGGCACGG ATTCCACCAT GCTCAGTTCG TTCCCCAGCG AGCTGGGGAC GCGCGCCGGT
CTGGTCGACG GAATGAAGGG AACGACACCG CTCACCCCGC TACCGGAGGA CTTCAAGAAC
CGGCTGCGGT CGATCGACTC CGGCCTGACC GACTTCGTCT ACGCGGCGGA AGCCTACGAC
GCGGTGCTGA TCAGCGCGCT CGCCGCGCAG CTCGCCGGCA CCACCGATCC GGCGGCCATC
GCGAAGCAGA TCGTTGGGGT CACCAACGAC GGTGAGCGGT GCGAGACCGC CGCGACCTGT
CTCGAGTTGG CCAGCGACGG GCAGGACATC GAGTACCGCA GCGTCTCGAT CACCCGAGCC
GGATTCACCA CGGCCGGTGA ACCCTCCACA GCCAGCTACG CCACCCTGCA CTTCGACGGG
GAGCAGATCA ACGACAGCAA GACGGAGTTC GTCGGCGCCG GCTCGGAGTC CACGGCGAGC
ACCGAAGCCC CGCCGCCGCC GAAGCGGCAG GGCGCCGGCG CGTCCAACCG CAACGACGGA
TCACCGCTGG TGCTGGGTGG CCTGCTGCCG AAGACCGGCG ACCTCGCGCT GTCCAACCCG
CCGCTCGCCG CTGGTGCCGC CCTCGCGATC GAGGAGATCA ACGCCGCCGG TGGCGTCCTC
GGTGACCCGG TCACCTGGAT CGACGGCGAC GACGGCACCA ACCCGGCAGT CGCCAAGGCG
ACCGTGGCGA GCCACGTCGC GGCCGGGGTG GACGTCATCA TCGGCGCCGG CGCGTCGGGG
GTCTCTCGAG CGGTGCTACC CGACGTGGTA GAGGCCGGGC TGGTGCTGTT CTCCCCGTCG
AACACCGACG CGAGCCTGAC CGACCTGGAC GACGAGGGCC ACTACTTCCG TACCGCCCCG
CCCGACAGCC TGCAGGGCCG GGCGCTGGCT GACGTCATTT TGCGGGACGG CCCGCAGCAG
GTCGCCATCG TGGCCCGCCA GGATTCCTAC GGTGAAGGCC TGCAGAACAT CGTGCGGTCC
GAGTTGGAGC GGGCCGGCAT CGACTCGGAC CGACTCAAGC TGATCACATA CCAGCCGCCG
GAGGACGCCG AGGCGGCGCC GGTCGACTTC ACCGCCGGAG TCCACGAGAT CACGAGCTTC
GGGGCCGACG CCGTCCTGAT CATCGGGTTC AGTGAGTCAG CCGGGCTGAT CCGGGCCCTC
GCCGACGCGG GGGTGCCGCT GCACCGCTGA
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| Protein sequence | MLISRATRAA TLAACAMSLL ATSACGTDRS DEATATPIRL YGTDSTMLSS FPSELGTRAG
LVDGMKGTTP LTPLPEDFKN RLRSIDSGLT DFVYAAEAYD AVLISALAAQ LAGTTDPAAI
AKQIVGVTND GERCETAATC LELASDGQDI EYRSVSITRA GFTTAGEPST ASYATLHFDG
EQINDSKTEF VGAGSESTAS TEAPPPPKRQ GAGASNRNDG SPLVLGGLLP KTGDLALSNP
PLAAGAALAI EEINAAGGVL GDPVTWIDGD DGTNPAVAKA TVASHVAAGV DVIIGAGASG
VSRAVLPDVV EAGLVLFSPS NTDASLTDLD DEGHYFRTAP PDSLQGRALA DVILRDGPQQ
VAIVARQDSY GEGLQNIVRS ELERAGIDSD RLKLITYQPP EDAEAAPVDF TAGVHEITSF
GADAVLIIGF SESAGLIRAL ADAGVPLHR
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