| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3618 |
|---|
| Symbol | |
|---|
| ID | 4605865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella amazonensis SB2B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008700 |
|---|
| Strand | - |
|---|
| Start bp | 4258611 |
|---|
| End bp | 4259069 |
|---|
| Gene Length | 459 bp |
|---|
| Protein Length | 152 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 639783039 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_929490 |
|---|
| Protein GI | 119776750 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAACACA CCCAAAGCGT TTGGCCCATG TATGTGTCGC TCAAAAAAGT TGAAAAACAG
GTGGGTCGAT GGACCTCCAC CACCTGGGAA CTGGATTCAG TCATCCCTGC CAGTCAGGCA
CGCGACGCAG AAGGGCAGTT GGTTCTGCTC GAGCTGTATC TGGACGAGCG CGCGAGTTAT
CGCCTGAATC TGGATATGAA TAACCCCATG CTTTACATCG TTTGTGACGA GCTTGCCGAC
GGTACCTGGG TGCCAGCCAG TATCAGTGCC GATCAAAACG TGGCAGCCGG GTGTCTGGAA
GGCGATACCC CGGTGCTGAA CATGGCCATG CCCGAAGCTG TGGCCTGCTG GATTGAAGCC
TTTATCACCC GTCACGGTGA AGTGGAAATC AGCGCCCACC GCCGCAAACA CGTTAACCGC
CGTAAGGAAC TGGCTGAAGC AAACGCCAGG AGGTCTTGA
|
|---|
| Protein sequence | MQHTQSVWPM YVSLKKVEKQ VGRWTSTTWE LDSVIPASQA RDAEGQLVLL ELYLDERASY
RLNLDMNNPM LYIVCDELAD GTWVPASISA DQNVAAGCLE GDTPVLNMAM PEAVACWIEA
FITRHGEVEI SAHRRKHVNR RKELAEANAR RS
|
|---|
| |