Gene Sama_3557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3557 
Symbol 
ID4605804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4191291 
End bp4191740 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content57% 
IMG OID639782978 
Producthypothetical protein 
Protein accessionYP_929429 
Protein GI119776689 
COG category[S] Function unknown 
COG ID[COG1671] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAAATTT GGGTCGATGC CGATGCCTGT CCATCGGTGA TTAAAGAGGT GCTTTTTCGT 
GCCGCCGAGC GGCGACAAAT CACAGTGACT CTGGTGGCAA ACCAGAGTGT ACGTGTGCCG
CCATCTCCTT TTATCAAGTC GATTCGGGTC GAGTCGGGTT TCGATGTGGC CGATAACGAA
ATCGTCAAAC GCGTCAGTAA AGGTGAACTG GTGATCACCG CCGATATTCC GCTGGCGGAT
GAAGTGATTG CCAAGGGGGC GCTGGCCCTC AATCCCCGTG GTGAGTTGTA CACTGCAGAG
AACGTTAAGG CCCGGCTGAA TATGCGTGAC TTTATGGAAA CCCTGCGTGC CAGCGGGATC
CAGAGTGGTG GCCCTGCCCC CCTGTCACAG GCCGACCGCC AGGCCTTTGC CAACCAGTTG
GATCGCTGGC TCGCCAGGTT ACCCAAGTAA
 
Protein sequence
MQIWVDADAC PSVIKEVLFR AAERRQITVT LVANQSVRVP PSPFIKSIRV ESGFDVADNE 
IVKRVSKGEL VITADIPLAD EVIAKGALAL NPRGELYTAE NVKARLNMRD FMETLRASGI
QSGGPAPLSQ ADRQAFANQL DRWLARLPK