Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3507 |
Symbol | |
ID | 4605754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 4139729 |
End bp | 4141669 |
Gene Length | 1941 bp |
Protein Length | 646 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 639782928 |
Product | sulfatase |
Protein accession | YP_929379 |
Protein GI | 119776639 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1368] Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAGCA CAAAACCGCC ACAAAGCATT TGGCGGATGA TAGCCATTTT TGGTCTGTTG GCCATGGTTG CCCTGACGGC AAGCCGTATT GGACTTGGTC TGTGGCAGAG TGACAGAGTG GCAGCCGCTG AGGGATGGAC CCATATGCTG TTGCAAGGCG CGCGGGTCGA TATTGCCACC CTGTGCTGGC TGTGGGGCAT TGCCGCCCTG GGCACAGTGA TTTTTGCCGG CAATCACGCC ATAGGCCGTG TGTGGCTGGT GCTGCTCAGA GGCTGGCTGG TGCTTGGCCT GTGGCTGATG CTGTTTCTTG AACTTTCAAC GCCTTCTTTC ATCGAGGAAT ACGGCATTCG CCCCAATCGC CTCTATGTGG AATACCTGAT TTACCCCAAA GAAGTCCTGT CCATGCTCTG GAGTGGCAGA CCGATGGAGT TGGTATTTGG CCTGCTGGCG TCCACCGGTA TTCTCTGGGG GGGGTGGCGT TTATCCGGGC GTCTTTCAAC CCATCTGGTT TATCCGCGCT GGTACTGGCG ACCCGTGTTT GCACTCCTGG TGATTATTGT GACCCTGATG GGAGCACGCT CGACCTTGGG GCACAGGCCG CTCAATCCGG CCATGGTGGC CTTCTGCGAC GATCCTCTGG TGAATTCGCT CACGGTAAAT TCGGCCTATT CACTGGTGTT TGCCATGACT CAGATGGGTC AGGAAGAAAA TGCCGCCAAG ATGTATGGTC AATTGACGGA CGAGGAAATC ATTGCTGCTA TCCGCGAGGA CAGCGGCAGG TCTGCTGAGC GTTTTGTTTC AGACCTATTG CCCAGTCTTT CGGATAACCC AGCGTCCTAT CAGGGCAAGC CCCGCAATCT GGTGATTATT CTGCAGGAAA GCCTGGGTGC CCGTTTTGTC GGTAGCCTCG GTGGTTTGCC ATTGACGCCC AATCTCGATG CGCTGTCTCA GGAAGGTTGG TACTTCGATA ATCTCTTCGC CACAGGCACC CGCTCGGTAC GCGGAATCGA GGCTGTGACC ACGGGCTTTA CCCCCACTCC CGCCAGGGCC GTAGTCAAAC TGGGCAAGAG CCAACAGGGC TTTTTCACCA TTGCCGATTT CTTACGTCGC CAGGGTTACG ACACTTCGTT TATCTATGGC GGTGAAAGCC ATTTTGACAA TATGCGCAGT TTCTTCCTGG GCAATGGCTT TGGCCGTATC GTCGACCAGG ATGACTACCA GAATCCGGCC TTTGTGGGCA GTTGGGGGGT ATCAGATGAA GACCTGATGC GCCGCGCCGA CAGTGAGTTT AAGCGCCTGC ATCAGCAGGG CACGCCCTTC TTCAGTCTGG TGTTCAGCTC CAGTAACCAC GATCCCTTCG AGTTTCCCGA TGATCGCATC GAACTCTATG AGCAGCCGAA GCAAACCCGT AATAACGCCG CCAAGTATGC GGATTTCGCT ATAGGTGAGT TCTTTAAGCT CGCCAAAAAT GCCGACTACT GGCAGGACAC GGTATTTTTG GTGGTGGCGG ATCACGACAG TCGTGTTGGC GGTGCCAATC TGGTGCCGGT AAATCGCTTT CGTATTCCCG GCCTCATCAT TGCCGATGGG GTGGCGCCCA AGCGCGACCA GCGGGTGGTG AGCCAAATCG ATTTGGCGCC GACCTTGTTA TCGCTGATAG GCGTTTCTGG CCGCTACCCC ATGCTGGGGA AAGATTTGAC CCGCACACCC GATAATTGGC CGGGGCGGGC GCTGATGCAG TACGACAAGA ACTTTGCCTA TATGCGTGGT CAGGATTTGG TGATCCTGCA GCCTGAGCGC GACCCCGAAG GTTTTACCTA TCAACCGGAA GATGGCAGCT TGCTGCCAAG TCCACAGCCC AAGAGTATGC AAAAAACCGC CTTGGCCTGG GCTTTGTGGG GAAGTCTTGC CTATCAGAAA GGGTTATTCA GGCAGGAGTG A
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Protein sequence | MRSTKPPQSI WRMIAIFGLL AMVALTASRI GLGLWQSDRV AAAEGWTHML LQGARVDIAT LCWLWGIAAL GTVIFAGNHA IGRVWLVLLR GWLVLGLWLM LFLELSTPSF IEEYGIRPNR LYVEYLIYPK EVLSMLWSGR PMELVFGLLA STGILWGGWR LSGRLSTHLV YPRWYWRPVF ALLVIIVTLM GARSTLGHRP LNPAMVAFCD DPLVNSLTVN SAYSLVFAMT QMGQEENAAK MYGQLTDEEI IAAIREDSGR SAERFVSDLL PSLSDNPASY QGKPRNLVII LQESLGARFV GSLGGLPLTP NLDALSQEGW YFDNLFATGT RSVRGIEAVT TGFTPTPARA VVKLGKSQQG FFTIADFLRR QGYDTSFIYG GESHFDNMRS FFLGNGFGRI VDQDDYQNPA FVGSWGVSDE DLMRRADSEF KRLHQQGTPF FSLVFSSSNH DPFEFPDDRI ELYEQPKQTR NNAAKYADFA IGEFFKLAKN ADYWQDTVFL VVADHDSRVG GANLVPVNRF RIPGLIIADG VAPKRDQRVV SQIDLAPTLL SLIGVSGRYP MLGKDLTRTP DNWPGRALMQ YDKNFAYMRG QDLVILQPER DPEGFTYQPE DGSLLPSPQP KSMQKTALAW ALWGSLAYQK GLFRQE
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