Gene Sama_3454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3454 
Symbol 
ID4605701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4084228 
End bp4084665 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content51% 
IMG OID639782874 
Producthypothetical protein 
Protein accessionYP_929326 
Protein GI119776586 
COG category[S] Function unknown 
COG ID[COG4103] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAGTG CACTGAAAAA GTTGCTGAAC CAGCGTCTGG GTGACACTGG CCCCCGTTTG 
ACGCAATCAG AAGCAGCGGC AGCACTCTTG ATTGAAGTGG TCTTGGCCGA CGAAGATCTG
TCCGGCAGCG AACAGCGTCT GTTGCCGGAA TTCATTGCAA GGCTTACCGG AGTATGCGTT
GATGAAGCAC ACGCACTCAT GACAAACGCC ATCGACCGCC ATCAGCAGGC GATTTCCTTG
TTTGAATACA CAGATCTTAT TAACAAGCAG TTTGATTTGG CCGAGAAACA AGCCCTGATC
CTGGCCATGT GGCAACTGGC CTTTTCAGAC GGTGAACTGT GCCAATACGA AGAGCAGATC
ATCCGAAAGA CGGCCGATCT GCTCTATCTC AAACACAGTG AACTGATACA GCTGCGCAAT
CAGGCCAAAC CCGATTAG
 
Protein sequence
MISALKKLLN QRLGDTGPRL TQSEAAAALL IEVVLADEDL SGSEQRLLPE FIARLTGVCV 
DEAHALMTNA IDRHQQAISL FEYTDLINKQ FDLAEKQALI LAMWQLAFSD GELCQYEEQI
IRKTADLLYL KHSELIQLRN QAKPD