Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_3452 |
Symbol | |
ID | 4605699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 4082728 |
End bp | 4083429 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639782872 |
Product | hypothetical protein |
Protein accession | YP_929324 |
Protein GI | 119776584 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCACTGT CCGTTATATT GAGCGAAGCT TATAACTTTT TTCGCAATCA CCTGGGTCAA CTCGCGGCTC TGACGATTCC GCTGCTGCTG GCGCAGACAG GCATCCAGCT GTGGCTGGGC AGTGAATTTG CCAAAGTTGA TGTCAATAAT CCGCAGTTTG GCTCACCACA CTTTTTTGCC ATGATGATGA TGCTCATCAT CTTCTCCGTT TTGATTGCCG CCCTGACGCT GTACTTGCAG CTGCGCAGCG AAGGCCATGA ACTGTCCACT GGCGCTGTGC TCAAAGCCAG TTTGCCGTTT GTGCCACCGC TGTTGCTGGC GGGGGTGTTT TCCGGCATGG CGATTGCGGC GCCCGTAATT ATTGCCGCCG CATTTGGCCC CCTGTGGCTG ATTGGTTTGG GTATCAGTCT CTACCTTTTT GCTCGCCTGG CCTATGTCAA CTTTATGGTG GTGGTGGAAC GTCTGACGCC CCTCGAAGCC ATCAAGGCAA GCTTCCGCTT TTCGTCTTCC ATCGTATCTA AAACCGTGGC CCTGCTGCTC TTGTATGTGC CCCTGTCTCT GGTGGGCGGT ACCCTGTCAC AACTGGTGGC CGGTGTTGGG CTTCCGCTTC AACTGATTGT AGATGCAGGA TTTTCCTTTA TTGCTCTGTT TGTTAACGTG GCGCTGTTCC GCCTCTACAT GGTTAACAGA ACTCAGGCTT AA
|
Protein sequence | MSLSVILSEA YNFFRNHLGQ LAALTIPLLL AQTGIQLWLG SEFAKVDVNN PQFGSPHFFA MMMMLIIFSV LIAALTLYLQ LRSEGHELST GAVLKASLPF VPPLLLAGVF SGMAIAAPVI IAAAFGPLWL IGLGISLYLF ARLAYVNFMV VVERLTPLEA IKASFRFSSS IVSKTVALLL LYVPLSLVGG TLSQLVAGVG LPLQLIVDAG FSFIALFVNV ALFRLYMVNR TQA
|
| |