Gene Sama_3452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3452 
Symbol 
ID4605699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp4082728 
End bp4083429 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content53% 
IMG OID639782872 
Producthypothetical protein 
Protein accessionYP_929324 
Protein GI119776584 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACTGT CCGTTATATT GAGCGAAGCT TATAACTTTT TTCGCAATCA CCTGGGTCAA 
CTCGCGGCTC TGACGATTCC GCTGCTGCTG GCGCAGACAG GCATCCAGCT GTGGCTGGGC
AGTGAATTTG CCAAAGTTGA TGTCAATAAT CCGCAGTTTG GCTCACCACA CTTTTTTGCC
ATGATGATGA TGCTCATCAT CTTCTCCGTT TTGATTGCCG CCCTGACGCT GTACTTGCAG
CTGCGCAGCG AAGGCCATGA ACTGTCCACT GGCGCTGTGC TCAAAGCCAG TTTGCCGTTT
GTGCCACCGC TGTTGCTGGC GGGGGTGTTT TCCGGCATGG CGATTGCGGC GCCCGTAATT
ATTGCCGCCG CATTTGGCCC CCTGTGGCTG ATTGGTTTGG GTATCAGTCT CTACCTTTTT
GCTCGCCTGG CCTATGTCAA CTTTATGGTG GTGGTGGAAC GTCTGACGCC CCTCGAAGCC
ATCAAGGCAA GCTTCCGCTT TTCGTCTTCC ATCGTATCTA AAACCGTGGC CCTGCTGCTC
TTGTATGTGC CCCTGTCTCT GGTGGGCGGT ACCCTGTCAC AACTGGTGGC CGGTGTTGGG
CTTCCGCTTC AACTGATTGT AGATGCAGGA TTTTCCTTTA TTGCTCTGTT TGTTAACGTG
GCGCTGTTCC GCCTCTACAT GGTTAACAGA ACTCAGGCTT AA
 
Protein sequence
MSLSVILSEA YNFFRNHLGQ LAALTIPLLL AQTGIQLWLG SEFAKVDVNN PQFGSPHFFA 
MMMMLIIFSV LIAALTLYLQ LRSEGHELST GAVLKASLPF VPPLLLAGVF SGMAIAAPVI
IAAAFGPLWL IGLGISLYLF ARLAYVNFMV VVERLTPLEA IKASFRFSSS IVSKTVALLL
LYVPLSLVGG TLSQLVAGVG LPLQLIVDAG FSFIALFVNV ALFRLYMVNR TQA