Gene Sama_3135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_3135 
Symbol 
ID4605382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3723299 
End bp3724105 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content56% 
IMG OID639782551 
Productenoyl-CoA hydratase 
Protein accessionYP_929007 
Protein GI119776267 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCAAC CCCCAGTCAC TCTGGTCATA AAGGATGGCA TAGCCTTTGT GACATTAAAT 
CGACCAGAAA AATTCAATGC GTTGAATTAT GAGATGTTTT CAGCGATCTG CAGGGTGCAG
AAGCTGCTGG CACGAAACAG ACAGGTGCGG GTGGTGATAC TGCAAGGCGC CCAGGGGCAC
TTCTCCTCTG GGCTTGATAT CAAGAGTGTC ACCCGTAAGC CGCTGCAGCC ACTGGGGCTG
CTGGCCAAGT GGCTGCCCGG TAATGCCAAT CTGGCTCAGC GGGTCTCCAT CGGCTGGAGC
CGTTTGCCAG TCCCCGTTAT TGCTGTCATC GAAGGCTATT GTTATGGCGG TGGCATGCAG
ATTGCGCTGG GGGCCGATTT TCGCTTTGCG GCTGAAAACG CCGAGCTGTC CATTATGGAA
GCCAAGTGGG GGCTTGTGCC CGACATGGCT GGACTGGTGA GCCTCAGAGG GATACTGCCA
AAAGACAAGG CGCTGGAATT GTCGATGACT GCCAGGGTAA TCGAGGCCGA TGAGGCAGCT
TCCCTTGGCT TGGTAACAAG GGTCACGGCT GCGCCTATGG ATGACGCCCT CGCCTTTGCC
GGGGAGTTAA TGACACGTTC GCCTGATGCT CTGGCTGCCA TCAAGGGCTC GATTCATCGT
AGTTGGAGTG GCAGTATTCG CCGTTTGCTG GCGCGGGAGT CATGGTATCA GGTGCGTCTG
CTGCTGGGGA AAAACTTTGC CATCGCCGCC CGGCGTCAGC AGGGTAAAAC CGACAGAGAC
TACAAACCAC GGCAAAAATT CTGGTAA
 
Protein sequence
MTQPPVTLVI KDGIAFVTLN RPEKFNALNY EMFSAICRVQ KLLARNRQVR VVILQGAQGH 
FSSGLDIKSV TRKPLQPLGL LAKWLPGNAN LAQRVSIGWS RLPVPVIAVI EGYCYGGGMQ
IALGADFRFA AENAELSIME AKWGLVPDMA GLVSLRGILP KDKALELSMT ARVIEADEAA
SLGLVTRVTA APMDDALAFA GELMTRSPDA LAAIKGSIHR SWSGSIRRLL ARESWYQVRL
LLGKNFAIAA RRQQGKTDRD YKPRQKFW