| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_3003 |
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| Symbol | |
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| ID | 4605250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 3576053 |
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| End bp | 3576829 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639782414 |
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| Product | hypothetical protein |
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| Protein accession | YP_928875 |
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| Protein GI | 119776135 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000180512 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGTACT GGCAAGTTGT GACTGCGGCC ACCGTGCTGT TATTGAATAT GGGATCGGCA
CAGGCGTTTT CATTGCCCAG ACCCGATAGT GACCAGGCTG CTGGTAAGTT GTTGCACATT
GAGATGCGTG CAGTGCAGGA TGATGCCGAT GCCCAGTTTT TGCTGGGGCT CATGTATGTC
TCCGGTCGTT ACGTGGATAA GGCGCCTGAA CTGGGATTGG AGTGGATTGG CCGTGCAGCC
AGTCAGGGAC ACGCCAAGGC GCAACAGACA CTGGCCGACT TGCGCTTTGA AGGCCAGCTG
GTAGCGCGCA ATCTTGCCGA AGCCGAACAT TGGTATTTGC AAATGAGCCT GCGTGGTGAG
CGCTGGGCCA ATTTTCGCCT CGGTTTTATT TATGCTGCCG GCGGTGACGG AGTAGAGCGC
AATTGCGGCC GTGCGGTCGA GCAGTTCCAG CTGGTGGGAG ACGAGGTGTC TCTTGGCAAC
GTGGCCTGGA TATTGGCGAC CTGTCCTGAA GCCCGGTACC GTGATGGCAA CAAGGCCGTG
ACTCTGGCGC TGAAACTGTT GGAAAACGAT GCCAATGACC CAACCAATCT GGATAACCTG
GCGGCCGCTT ACGCAGAGCA GGGCGACTTC AACCGGGCCG TTGCCGTGCA GGAGAAAGCC
ATCTCGGCAT TGGAGCTGAA AAAGCAGGCC GACATCAAGG CAGAGGAGTT TCATCAGCGA
CTGCAACATT ATCAGCAGGG CAAGCCCTAC CGTGAAGTGA TCCCGCTTCA GCCCTGA
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| Protein sequence | MKYWQVVTAA TVLLLNMGSA QAFSLPRPDS DQAAGKLLHI EMRAVQDDAD AQFLLGLMYV
SGRYVDKAPE LGLEWIGRAA SQGHAKAQQT LADLRFEGQL VARNLAEAEH WYLQMSLRGE
RWANFRLGFI YAAGGDGVER NCGRAVEQFQ LVGDEVSLGN VAWILATCPE ARYRDGNKAV
TLALKLLEND ANDPTNLDNL AAAYAEQGDF NRAVAVQEKA ISALELKKQA DIKAEEFHQR
LQHYQQGKPY REVIPLQP
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