| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2993 |
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| Symbol | |
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| ID | 4605240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 3566298 |
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| End bp | 3567245 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639782404 |
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| Product | SUA5/YciO/YrdC family translation initiation protein |
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| Protein accession | YP_928865 |
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| Protein GI | 119776125 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0009] Putative translation factor (SUA5) |
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| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGCAAA TCACCGACCA AATTTCCCTT GCCGTGGCTG CCCTTAACCG GGGTGAGCTG
GTGGCTATGC CCACAGAGAC CGTGTATGGC CTTGCCGCCG ATGCGGGCAA CGCGGATGCC
GTCGCCAAGG TATTTGCCTT GAAGGGGCGT CCGGCGACCA ATCCGCTGAT TGTGCATGTG
GCCGACGCAA GCTGGATTAA TGACTGGGCC AGCGACGTGG GACAGGACGC CGAGGCGCTG
ATGGCAGCGT TTTGGCCCGG GCCACTGACT CTGGTTCTGC CTGCCAAGAC CTATGTATCC
CGTGCTGTCA CCGCCGGGCA GAATACGGTT GCCCTGAGAA TGCCGGCTCA TCCCCAGGCG
CTTGCCTTGC TGAAGGATTT TGGCCGCGCC CTGGTAGCCC CCTCGGCCAA CAAGTACATG
TCCATCAGCC CCACCAGCAG CGACCATGTG GCGCGCCAGT TTGCCGGTGA TGAACTGCTT
ATTCTGGAAG GTGGCAACTG CAGGGTGGGG CTTGAATCCA CCATAGTGGC GCTGCTTCCC
GGTGATGAAC CCAGATTACT GCGCCCGGGC ATGGTATCAG TTGCCAGTAT CGAAGCCGTG
CTTGGCCGCC CGGTTGCTCA GCAAAGCGGT GGCGTGGTGG CCCCCGGGCA GCACCACAAG
CATTATTCCC CCGGCTTACC CTGCTACCGA TATGGCGCAG AATCTGATGT CAGCCACTTG
CTCCAGGCCA ATGACATCGG CTGGATTTTC TGCGGCAATG CAGTACCAGT AGCCGGAAAA
GCCATAGAGC TCGGCGCAGA CCCCGATGCC TATGCCCAGG GGCTCTACGA TGCCTTGTAT
CAGCTCGACC ACGAAACCCT CAGTGCGATT TATATCGCCG AGCCGCCACA CAGCAGTGAA
TGGCAAGCCG TGCAAAACCG TCTTGAACGT GCAGCCAAGC CACGCTAA
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| Protein sequence | MAQITDQISL AVAALNRGEL VAMPTETVYG LAADAGNADA VAKVFALKGR PATNPLIVHV
ADASWINDWA SDVGQDAEAL MAAFWPGPLT LVLPAKTYVS RAVTAGQNTV ALRMPAHPQA
LALLKDFGRA LVAPSANKYM SISPTSSDHV ARQFAGDELL ILEGGNCRVG LESTIVALLP
GDEPRLLRPG MVSVASIEAV LGRPVAQQSG GVVAPGQHHK HYSPGLPCYR YGAESDVSHL
LQANDIGWIF CGNAVPVAGK AIELGADPDA YAQGLYDALY QLDHETLSAI YIAEPPHSSE
WQAVQNRLER AAKPR
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