Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2947 |
Symbol | |
ID | 4605194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 3502876 |
End bp | 3504378 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639782358 |
Product | hypothetical protein |
Protein accession | YP_928819 |
Protein GI | 119776079 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.424974 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.148892 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCAC AAGCGAAGAA GTCACTCTTG GCTTTAGCCA TCACCGCGGG TATCGGCATG TCAGCGCAGG CCTTTGCCAG CGATATCAGC GAAATCCAGG TAAACCAGTC CGGCTATGGT AACGACACCA CTGTGGAACA AACAGGTGTA CTGAACCTGG CGCAGGTTGA TCAACTGGGC GATGAAAACA CCACCACAGT AACCCAGGAC GGTGTATGGA ACGAAGCCTT TGTGGATTCT GAGGGCAACC AGAATAGCGT GTCTGTTGAG CAAGCCGAAG ACTGGCACAT TGCCGGCGTG AGCCAAACCG GTGATAACAA CACGGATAAC GTGGTCCAGA CAGGCTTCTT CAACCAGAGT GACGCGGTAA CTGCCGGTAA CGGAAACGCC GTTGACGTGA TGCAGGCAGG TGATCAGAAC GCAAGCAATG TAGAACTGAC CGGCGACAAC AACAGCGCCT GGGTTGATCA GGACGGCAGC AGCAACTATG CCGTTTTCCG TGTTCAGGGC AATGATAACG ACGGTGAAAT CACTCAGCTG GGTAACAACA ACCAGGGTGG TCTGATTGCT CTGGACTTCA CTGCCAACGT TGGCAACAAC AACGATGTCT CCATCTATCA GGAAGGTGAC GACAACGTGG GTGGTGTGCG CGGCGTTGCC GGTGACAACA ACGAAGTTGA GATTGAGCAG GTTGGTAACA ACAACGTGGG CTTTGTTTAC GCCCTGCAAG GCAGCAACAA CGATCTGACC ATGACCCAGG ATGGCGATCG CAACGTGGCG GTGCTGGAAT TCACCACCGG TGACAACAAC GACGTTGAAA TTAACCAATC TGGCTCCGAA AACGCCATCG GCGATAGCCT GATAGCGGTT ATCGAAGGCA GCGACAACAT GATAGACATC GAGCAGGAAG GCTTCTCCAA CAGCGCTCAG TTTATCGTTG ATGGCGACGA TAACGATGTG GATCTGGAGC AGGAAGGCGA TCTGAACTAT GCCGAATTTG TTGCTGTTGG CAATGACAAC ACCCTGAACC TGAGTTCAGA AGGTAACGGC AACCAGCTGC TGGCCGGTGC CTTTGGCGAA GACAACAGCC TCGAAGTGGC TCAGGAAGGC GATGTCAACT ATGCATACAG CGTTGCATTT GGTAACGACA ACGAGGTGGA TATTGCGCAA ATGGGCAATG ACAACGAAGC CATTGTCACC ATCGAAGGCA ACAACAACAC CGACATCATA GGTACCCAGT CTGGCGACCT CAACGTACTG GACCTGCTGA TCCAGGGCGA TGAAAACCTG GCACAAATCA CCCAGACCGG TAACGGCAAC TGGGTAGGTG GCGATGCCGG TGCATTCGCA GTGGTTGGCG AAGGCAATAG CTTCATCGTG GCTCAAAGCG GCAACGACAA CCTGGTGACC GGCGCTCAGA TGGGCAGCAG CAACGTGATC AACGTGACTC AAGTGGGTAA CGAAAACGTA GCGACTGTTA TCCAGAACGG CGCGCCACGC TGA
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Protein sequence | MKSQAKKSLL ALAITAGIGM SAQAFASDIS EIQVNQSGYG NDTTVEQTGV LNLAQVDQLG DENTTTVTQD GVWNEAFVDS EGNQNSVSVE QAEDWHIAGV SQTGDNNTDN VVQTGFFNQS DAVTAGNGNA VDVMQAGDQN ASNVELTGDN NSAWVDQDGS SNYAVFRVQG NDNDGEITQL GNNNQGGLIA LDFTANVGNN NDVSIYQEGD DNVGGVRGVA GDNNEVEIEQ VGNNNVGFVY ALQGSNNDLT MTQDGDRNVA VLEFTTGDNN DVEINQSGSE NAIGDSLIAV IEGSDNMIDI EQEGFSNSAQ FIVDGDDNDV DLEQEGDLNY AEFVAVGNDN TLNLSSEGNG NQLLAGAFGE DNSLEVAQEG DVNYAYSVAF GNDNEVDIAQ MGNDNEAIVT IEGNNNTDII GTQSGDLNVL DLLIQGDENL AQITQTGNGN WVGGDAGAFA VVGEGNSFIV AQSGNDNLVT GAQMGSSNVI NVTQVGNENV ATVIQNGAPR
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