Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2910 |
Symbol | |
ID | 4605157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 3459837 |
End bp | 3461318 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639782321 |
Product | hypothetical protein |
Protein accession | YP_928782 |
Protein GI | 119776042 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTTCTT CTGTGGGTGG GCTCGATGAG AGCCTGTGGT ATCTGACCCT TGGGGAACCC ATGCTGCCCC GCGCTTCGCT GGAAAATGAT ATCGAGGCGG ATGTTTGCAT TCTGGGCGCC GGGTACTCAG GCCTGTGGAC GGCCCTGTTT CTCAAACAGA AACAGCCTTC GCTGAAGGTG GTTGTGCTTG AAGCTGCCAT GGCTGGAGAG GGGGCGTCCG GGCGCAACGG CGGTTGGCTG ATGGGCAGCT TTGGCGGCGA TTTGGGTTAT CTGGCACAGC TGGATGGCGA GGCCCGGCGC CGGGCAAAAG CGCGCATTAC CGGCACGGTT GCCCGGGCGG CCAATACCTT CAGCGAGCTG GGTATCCAAT GCGACTTCCA TCATGGCGGT AACCTGTATC AGGCGGCGCG CTACCCCCAG CAGCTTAAGC GATTGCAAGC CGAGCTGGCG CATTTTCGTG AAGCCGGTTT TGACGAAGAA GACTATCGCC TGCTGTCGGC CGCAGACGCC AGCCACGCCC TTAATCTGCC GGGGACACAA GCGGCGCTCT ACACCCCTCA CTGTGCCCGG GTGCATCCGC TGAAGCTGGC CCGGGGCCTT GCCCGGGCCG CCGAACGTGC CGGCGTGGTT ATCTATGAGC ACAGCCCTGT GCAGCTGGCT GAAAAAAGCA GGTTCACCCC CTCTGAAAGC GGCCTGAAAA CCCAGAAAAA CACCGTCTTT ACCCCAAAGG GCTCGGTCAG GGCCGCTGTG GTGGTGGCCG CGCTCGAAGG CTACCAGCGG CTCCTGGGGC TTGATAACAG AACCAGCCTG CCGGTGTTCA GTGTGCTCTG CGCCACCGAA CCCCTGAGCG AACAGCAATG GGCCACTATC GGTCTTGAAA ACCGCGAAAC CTTTGCCGAT GCCTCACGGC TTATCACCTA CGGCCAGCGC AGCGCAGACA ATCGCTTGGT ATTTGGTGCA CGCGGTGGCT ATGGCTTTGG CGGCGCAGTG AAAACCCAAT TTGGCTTTAC GCCCCGCACG TTGGGTGAAT CGCCAAGAGG CGATATCTTT GACCTGAGAA GTCAGCTGTT GCAGGCGTTT TTCCCCGCCC TTGAGGGCAC GCAAATCACC CATGGCTGGG GCGGCTGTTT GTCGCTCTCG CGGGCGTTTA GGCCCCATGC ACTCTTCGAT GAAGCTGCGG GGCTTGCTTT TGTGGGCGGC TATGGCGGCG AAGGCGTGGG CGCCAGCATG CTCTTTGGCG AAACCCTGGC CGAGCTGATT GCCCGGCCAG AGGGTGAGCT CGCTGGTATG CCATGGGCGT ACCGGGGCGC CGTGAGTGAG CATCTGCGCC GCTGGGAGTC GGAGCCACTT CCCTGGCTGG GTTACAGCGC AAGCGGGCTG CTTTACCGGT TTGAAGAGCG CCTGCTCTGC CGCAAGCCTC AGCCAGGGTA TACGCCTGTG GTCAGTCGGC TTGCCGATGC CCTGGAAATC CTGATGAGTT AG
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Protein sequence | MISSVGGLDE SLWYLTLGEP MLPRASLEND IEADVCILGA GYSGLWTALF LKQKQPSLKV VVLEAAMAGE GASGRNGGWL MGSFGGDLGY LAQLDGEARR RAKARITGTV ARAANTFSEL GIQCDFHHGG NLYQAARYPQ QLKRLQAELA HFREAGFDEE DYRLLSAADA SHALNLPGTQ AALYTPHCAR VHPLKLARGL ARAAERAGVV IYEHSPVQLA EKSRFTPSES GLKTQKNTVF TPKGSVRAAV VVAALEGYQR LLGLDNRTSL PVFSVLCATE PLSEQQWATI GLENRETFAD ASRLITYGQR SADNRLVFGA RGGYGFGGAV KTQFGFTPRT LGESPRGDIF DLRSQLLQAF FPALEGTQIT HGWGGCLSLS RAFRPHALFD EAAGLAFVGG YGGEGVGASM LFGETLAELI ARPEGELAGM PWAYRGAVSE HLRRWESEPL PWLGYSASGL LYRFEERLLC RKPQPGYTPV VSRLADALEI LMS
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