Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2718 |
Symbol | |
ID | 4604965 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 3250949 |
End bp | 3251749 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 639782129 |
Product | hypothetical protein |
Protein accession | YP_928590 |
Protein GI | 119775850 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2856] Predicted Zn peptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.588824 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAAA AACAGCGCGG AGCAATCGAA GCGGAAGATT TATTAGAAGA TTTGGGTATA GATTCACTAC CAGTCGATCC CTTTGAAATA GCTAGTCTAG TTGACAATCC ATCCTTTCGA GTAGTTTTTA ATTTAGTTCC ATATGATGCA AAGAGCATTC TTGGAAAAGC GATAGGAAAT GACTCTGGCG CTGTCGTAGA TATCAATTCC AACATTCCGG ATGAAGGAAG ATTGAATTTT ACTGCTGCAC ATGAATTGGG GCATGTTTGT ATGCATATTA TGCCTGGAAG TAAAACTTCT TTTGAATGCG GCAAGCAGCA ACTTCAATCT TCCCATGATG ACCCCTTTGA AAAAGAGGCT AATGAATTTG CATCAGCATT GCTGATGCCT GAAAAACTAA TTAATGAGCT AACTGATAAA AATATTAACT GGAAAAACAT AAAACATATC AAGGATATAT GCAAAACTTC TCTAGAATCG ACTTTCAGAA GATTATCAAC AATTTACAGT GAGCCATGTG CATTAATTAT CCACAAAAAT GGCAAGTTCA CTAGGTTTGT AACTTCGCCA TACTTTGAAG TTTATATAGA GAGAAATAAT TTATCAGACG AGCAGTTAAA AAAATGTGCT AATGGATTAA ATAATGAATT TTTTAGCAGT TTTGAAGAGT CTTCCCCTTC CGGCTGGGTA AAACCAAAGG TTAGATCCTA TACATTACAA AAAATTTATA CGAGTTCAGT ATCATTATCC GATGGCTTTG TATATACCCT TATAAAATAT AATGACAAGT GCTTAAATTA G
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Protein sequence | MIKKQRGAIE AEDLLEDLGI DSLPVDPFEI ASLVDNPSFR VVFNLVPYDA KSILGKAIGN DSGAVVDINS NIPDEGRLNF TAAHELGHVC MHIMPGSKTS FECGKQQLQS SHDDPFEKEA NEFASALLMP EKLINELTDK NINWKNIKHI KDICKTSLES TFRRLSTIYS EPCALIIHKN GKFTRFVTSP YFEVYIERNN LSDEQLKKCA NGLNNEFFSS FEESSPSGWV KPKVRSYTLQ KIYTSSVSLS DGFVYTLIKY NDKCLN
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