Gene Sama_2717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2717 
Symbol 
ID4604964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3250593 
End bp3250952 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content39% 
IMG OID639782128 
Producthypothetical protein 
Protein accessionYP_928589 
Protein GI119775849 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.570521 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACA AAAATACACA AGCTCAAATA ATAAGCAGTA AAATCAAATC ATTAAGAGCT 
AAGCTAGATT GGAATCAATC TAGGCTTGCT ACAGAAGCAG GAATAAGTGG AGCTGCCCTC
AGTAAGATAG AACAGGGAGA TAAGCGAGTT CCTACCATCG TAGTTCTAAG GAAATTAGCT
ACTGCTCTAA AAGTTGATGT ACATGAACTG ACCGGAGAAG ATGCTCCAAA TCGCTCTGCA
CAAGCCGAAC GTACTATGGA GTTTTATAGA AAATTTGGCG TGCTTGAAGA ACTCAGTGAA
GATGACCAAA AGCGGCTAAT AGATATGGCT AATAGGTTGA AGGAAATCAC AAATAAATGA
 
Protein sequence
MTDKNTQAQI ISSKIKSLRA KLDWNQSRLA TEAGISGAAL SKIEQGDKRV PTIVVLRKLA 
TALKVDVHEL TGEDAPNRSA QAERTMEFYR KFGVLEELSE DDQKRLIDMA NRLKEITNK