Gene Sama_2690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_2690 
Symbol 
ID4604937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp3219020 
End bp3219586 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content56% 
IMG OID639782101 
ProductMarR family transcriptional regulator 
Protein accessionYP_928562 
Protein GI119775822 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCAG AAACCATCCA GATCCAGCAG TTGCTGGAAC GCATTGCGGC GCTGCTGCGC 
GGCGAAAGGC GAAACAAATT AGTCGAGTTG GGGCTGCTGC CGGTGCAGTT CGATGCCCTG
TGCTATCTGG GTGAGTGCAA CCGCTACTCG GATACCCTGA TGGCCCTGTG TGAATACCTG
GGCCAGACCA AGGGAACCGT GTCGCAGACG CTGAAGGTGT TGGAGAAAAA GGGGCTGATT
GAGCGCCATG CCGATGCCAA AGACAAACGT GTGATACACC TCAAACCCTC TGAAACCGGA
TTGGCGCTGC TCGCCGAGCT GACCCAATCT CCCTTGCTTT GTGCCTTATA CACTGAGCAT
GGATTTGACT CCCGGCTGAC AAGCGCCCTC GCTGCACTTT TGAAGCAGCT GCAACAGACT
AATGGTGGCC GCGCCTTTGG CGTGTGCCAC CAGTGCCGCT ACAATCAAAG CCCTGCAGAA
GGGCATTTCC AATGCGGCCT GACCGGCGAG TCCCTGTCTG AGGCGGATAC CCAACTTATC
TGCCGTGAAT ATGAGCATAT TGATTAG
 
Protein sequence
MTSETIQIQQ LLERIAALLR GERRNKLVEL GLLPVQFDAL CYLGECNRYS DTLMALCEYL 
GQTKGTVSQT LKVLEKKGLI ERHADAKDKR VIHLKPSETG LALLAELTQS PLLCALYTEH
GFDSRLTSAL AALLKQLQQT NGGRAFGVCH QCRYNQSPAE GHFQCGLTGE SLSEADTQLI
CREYEHID