| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2417 |
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| Symbol | |
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| ID | 4604666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2907836 |
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| End bp | 2909986 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639781814 |
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| Product | TPR domain-containing protein |
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| Protein accession | YP_928291 |
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| Protein GI | 119775551 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.614244 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.451295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACTCA TTTTATTGGC TTTTTCGCTG TTATTTTTGT GCTTATCCCA TTTTGCACTC
GCCAGAGACC TCAAGTCGGA AGAAGTTGAA CTTAGAGAGT CACCGCAGCA GATTTTTGAC
CGGGTCAATG CGTCGCTGCC GCTCCCCCCA TCAGTGCTTG AAACCCGTGC AGCATTCAGT
GCTTACGCAA AAGAACAAGG CTTATCGGTA GAAGAACTTG CAGAACTCCT CGCCCTGATT
GCCCGAGCCA ATTTGCAACC CAATGTTGAA AATGCCAACA AGGCCCATGA CCTTGAGCTG
ATTGTCAGTT CACTGGAAAA GTCAGCAGCT ACGCCCTACG AAAAAGCCAT GGCACTGATG
CTCAGAGGGC GGATGCTGGG CAGGCTTGAA CTCAAGTTCG AAGAAGCGGC CGGTTATTTC
ATTCAGGCGC TTACTCAGGA TCAGGAAAGC CAGAGTCTGG CCTCGCAGGT GCTGAGGCTC
AACCTGCATG AGCAGCTCGG TGGTATGTAT CTGATGATCA ATCAGGACGT AACCGCTCTG
GTGCATCTGC AGAAATTCCG CGATCAGGCC TATCAACTTC GCGATGACTA TCTGATAGCC
AACGCCGAAG CTGAGCTTGG CAAGTACTAC AACAAAAAGC AGGAACTGAC CAAGGCGTTG
CAGCATTACA GCGAAGCCTT GCGGCTTTCG GATCAGGAAC ATCATCCTTT CCAGCGTGCG
TTTCTGCAAA TGCAGCTGGC CAAGGTGTAC CGTGATTTAG GGCACCGCAG CGAAGCCTTG
AGCCATGCCC ACGATGCTGC CGAAACCTTT GGTCAGATAG GCAGCGAAAA CTTCCTGTCG
GCTACCCTGA CGGTCATCGC CATGACCCAT GCAGGTAATA ACGAGTGGAA CAAGGCCATC
GACTATTACC TCAATGCCCT GCAGGTAGAC AGACGCAGTG GCAATTATTC CGCCCTTGCC
CGTAACTTCC ACAACCTGGG AGAAGCCTAT GGTGAGCTGG GTGAACTGGA ACTGTCGCTG
AATTATCTGC AGCAAGCCAA TCAGATGTTT GCGGAGCGGA AAATGAAGCA CTTTTTGGTG
TATAACGAAG CTTTGATTGC CAAAACCTTC TGTAAGTTAT CCCAGTGGCA GCTCTGCCGT
GAGCATGCAG ACATGGCCTA CGACCTTGCC CGTCAGCAGT CTCTTAAAGA TGTGCTGATC
GAGTCCCTCA GCCAAAAAGT CATTGCCGCC AAAGCCCTTG CAGACTGGCA AGGTGCCCTG
GATTTCCAAC AACACATTAT CAGTTTGCAA CAAGAAGAAG CCGCCCCTCA GGTGGCTGCC
AATCCAAGCA CGTCGGCGCT GACAGAACAA AAACTCAAGC TGGATTTACA TCAAAAGAAT
GAGCAGCTGC AAGAAAGCCA TGCCCATCTC AGGGAGCGCA CTATACTGCT GGCCGGCAGC
CTGATGCTGG TGCTCACTCT GGCAACCATG GTGTGGCACT ATCGTCGCTC GCGTTGGGAA
CTTAAGGCCA AAATTGCATC GTTAAAGCAT AAACTGCCCC TGGACGGAGC CACGGCACAC
CCCGGTTTGC CTGCCCTTCG CAGTGCCATC AAAAAACCAA AAACCAAGGC TGTGGCACTG
CTGCGAATAG CCAGCTTATG TGAGTCTGAT ATCCGACTTG GCCATAAACG CATGGTGGAA
GCGGCGCAGG AAACAGTAAA CGCCATTGAA AAACTGCCGG GTATCAAAAC CTATGTAATA
CGCCCGGGTC TTATTGGCTT AAGTTTCGAT GAACCTATCA AGGCTGCAGA TGCGCTGCTC
TTCAACCTCA GAAACCAAGT TCCTCATATC GAAGGCCGGC TGCAGCTCAG CTTTATTAAC
CTGCCCTTAC TGCCAAATCC GGAACTTTTG ATACCGGATA ACAATCATAT AGAAGTACTT
GAATTGGCAA TGGCTGGCGC CTTGTCACTG GATGAAGACA AAGACCTTTA CGTCACCTTA
TGGGCGCTGG ACTTTACGCC TTCAGCGGTC TTCGGTCACC CCCTGTATTT ACACCTGGAA
AAAAGCATCG GCCGCGGCCT TATTCGGGTG GAAACCAACG GCGACAAGGA TAAAATTGTC
TGGCCCCAAT GGCAGACACC TGTGCCAGCG GATGATCCAT TAATTAATTG A
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| Protein sequence | MRLILLAFSL LFLCLSHFAL ARDLKSEEVE LRESPQQIFD RVNASLPLPP SVLETRAAFS
AYAKEQGLSV EELAELLALI ARANLQPNVE NANKAHDLEL IVSSLEKSAA TPYEKAMALM
LRGRMLGRLE LKFEEAAGYF IQALTQDQES QSLASQVLRL NLHEQLGGMY LMINQDVTAL
VHLQKFRDQA YQLRDDYLIA NAEAELGKYY NKKQELTKAL QHYSEALRLS DQEHHPFQRA
FLQMQLAKVY RDLGHRSEAL SHAHDAAETF GQIGSENFLS ATLTVIAMTH AGNNEWNKAI
DYYLNALQVD RRSGNYSALA RNFHNLGEAY GELGELELSL NYLQQANQMF AERKMKHFLV
YNEALIAKTF CKLSQWQLCR EHADMAYDLA RQQSLKDVLI ESLSQKVIAA KALADWQGAL
DFQQHIISLQ QEEAAPQVAA NPSTSALTEQ KLKLDLHQKN EQLQESHAHL RERTILLAGS
LMLVLTLATM VWHYRRSRWE LKAKIASLKH KLPLDGATAH PGLPALRSAI KKPKTKAVAL
LRIASLCESD IRLGHKRMVE AAQETVNAIE KLPGIKTYVI RPGLIGLSFD EPIKAADALL
FNLRNQVPHI EGRLQLSFIN LPLLPNPELL IPDNNHIEVL ELAMAGALSL DEDKDLYVTL
WALDFTPSAV FGHPLYLHLE KSIGRGLIRV ETNGDKDKIV WPQWQTPVPA DDPLIN
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