Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2341 |
Symbol | |
ID | 4604591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2807634 |
End bp | 2808254 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639781739 |
Product | TetR family transcriptional regulator |
Protein accession | YP_928216 |
Protein GI | 119775476 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.554096 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATCCA TGCAATCTTC CAGCCCCAGT CGCAGTGAAC AAAAGCGCAG CGCCATTTTG GAGGCGGCAA TCGCACTTTT TTGTGCCCAG GGTTTTCCCA ATACCAGTAT GGATGAGGTG GCCAAAAAAG CCGGAGTGTC CAAGCAAACG GTGTATGCCC ACTTTGGTAA TAAGGACGAT TTGTTTGTAG CCTCTATCGA GTGCAAATGC GACGTGCATG AAATAGCACC TGAGATGCTG GCGGATGTGG CGCATCCCGA ACAGGTGCTG TTACAGTTTG CCAGTCGCTT TGGCGACATG ATTGTCAGCG AAGAAGCCTT GACGGTTTAC CGGGCTTGCG TGTCACAGTC TGAGACGCAT CCGGAAGTCT CCCGTTTGTA TTTTGCGGGC GGGCCAAGCC GGATCCTCAC TATGCTCAGC GACTACTTTT CCAGGGTGGA AGCGACAGGT GCATTTCGGT TCGGTGATGT GCGCCATGCG GCAATCCGTT TATGCCTGAT GCTTTACGGA GAAAGGCGTC TGATGTTGGA GTTGGGATTA CCACTCCAGG AAACAGAAGG TGAACGGGCC CGCTATCTTG CAGACACAGT GAAAATGTTT TTGGCTGCCG CAAAAAGCTG A
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Protein sequence | MTSMQSSSPS RSEQKRSAIL EAAIALFCAQ GFPNTSMDEV AKKAGVSKQT VYAHFGNKDD LFVASIECKC DVHEIAPEML ADVAHPEQVL LQFASRFGDM IVSEEALTVY RACVSQSETH PEVSRLYFAG GPSRILTMLS DYFSRVEATG AFRFGDVRHA AIRLCLMLYG ERRLMLELGL PLQETEGERA RYLADTVKMF LAAAKS
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