Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2320 |
Symbol | |
ID | 4604570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 2784994 |
End bp | 2785914 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639781717 |
Product | chemotaxis protein CheV |
Protein accession | YP_928195 |
Protein GI | 119775455 |
COG category | [K] Transcription [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [COG0835] Chemotaxis signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.698234 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.255434 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAGCA TTCTTGAGTC AGTCAACAAG CGTACCCAAC TGGTGGGGCA AAACCGATTG GAGCTGCTGC TGTTCAAGCT GAACGGCCGT CAGCGCTTCG GTATTAACGT CTTTAAAGTA AAAGAAGTAT TGCAGTGCCC CCCCCTGACC GGATTACCCA AGCTCAATCC TTTCGTGCGC GGTGTGGCCC ATATTCGTGG AACCACCATT TCTGTGATTG ACCTCAGCGC GGCCACCGGT GGCAAACCCA TAGAGAACAT TCAAAACTGC TTTATTATTA TCTCTGAATA TAATCGCAGT GTTCAGGGTT TTTTGGTGAA TTCAGTCGAG CGCATCATCA ACATGAACTG GGAAGCCATA ATGCCGCCGC CCCAGGGGGC GGGTCGCTAC TCCTATTTAA CAGCGGTCAC TGAGATTGAT GGAGAGCTGG TTGAAATCCT GGACGTTGAA AAAATTCTTG ATGAAATCAG TCCGGTCCGT ACTGCTATCA GTGAAGACAC TGACGCACAG TTAACCATTG ATCGTGGGCA GCACTTCCAC ATTATGGTGA TTGATGACTC TGCCGTGGCC CGCAAGCAAA TCATCCGTGC GCTCACCTCT CTCGAGCTGC AGATTGATAC GGCAAAAGAT GGCCGTGAAG CACTGGAAAA ACTGAAAGCC ATTTCGGCGG AAATGACCAA CGTGGCTCAC GAGATCCCGC TGATTATCTC CGATATCGAG ATGCCGGAAA TGGACGGTTA CACCCTGACC GCCGAAATCC GTGATGATCC CAAACTCAAA GACATCAAGG TGATTTTACA CACGTCGCTG AGCGGCGTGT TTAATCAGGC GATGGTTCAG AAAGTGGGTG CCAATGACTT TATTGCCAAG TTCAACCCTG ACGAACTGGC CGCGGCCGTG AACAAGCATC TGAGTCTTTG A
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Protein sequence | MSSILESVNK RTQLVGQNRL ELLLFKLNGR QRFGINVFKV KEVLQCPPLT GLPKLNPFVR GVAHIRGTTI SVIDLSAATG GKPIENIQNC FIIISEYNRS VQGFLVNSVE RIINMNWEAI MPPPQGAGRY SYLTAVTEID GELVEILDVE KILDEISPVR TAISEDTDAQ LTIDRGQHFH IMVIDDSAVA RKQIIRALTS LELQIDTAKD GREALEKLKA ISAEMTNVAH EIPLIISDIE MPEMDGYTLT AEIRDDPKLK DIKVILHTSL SGVFNQAMVQ KVGANDFIAK FNPDELAAAV NKHLSL
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