| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2245 |
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| Symbol | |
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| ID | 4604495 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2710189 |
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| End bp | 2710767 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 639781642 |
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| Product | pilin glycosylation protein |
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| Protein accession | YP_928120 |
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| Protein GI | 119775380 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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| TIGRFAM ID | [TIGR03570] sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0796956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0504546 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCTGGAT CATCTTTGCT TATTATTGGC GCTGGTAGTT TCGGTAGAAC GGTTTATGAG
GCCGCAATGA TGTCTGGTGA TTGGCAGATT ATTGATTTTT TAGACGATAG CTACCCTTCA
CATACGGGGC CTGTTCAGTT TAAAGTGATT GGAAAAACTG ACAGTTTTGC CAGTTTCTCT
TCGCAATACG ATGGTGTTGT AGTTGCTATC GGTAATAATC GTATCAGGAA AGACAAAATT
GAGAGCGTAC TACTTAGCGG GGCTAACTTG GTTAACATTT TCCACCCCAA AGCATTTGTT
AGTCCGTTGG CGAAAGTCGG TCGAGGTGCA TTGGTAATGG CTGGTGCTGT TGTAGGTGCA
TTCGCAACAA TAGGAGTTGG GTGCATACTA AATCCTAATG CTGTTGCAGA CCATGATACT
GCAATGGGTG ACTATAGCCA TCTTGGCGTT GGAGCAGTAA TGGCTGGTAC ATCCCTATTA
GGGGTCGGAG CTTGGGTACT CCCTGGAGCA GCCTTGAGTT ACGGAGAATC AGTCGCTGAT
TGGGTAACCC TTGCACCACC GACATGCTTA ACCCTGTAA
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| Protein sequence | MAGSSLLIIG AGSFGRTVYE AAMMSGDWQI IDFLDDSYPS HTGPVQFKVI GKTDSFASFS
SQYDGVVVAI GNNRIRKDKI ESVLLSGANL VNIFHPKAFV SPLAKVGRGA LVMAGAVVGA
FATIGVGCIL NPNAVADHDT AMGDYSHLGV GAVMAGTSLL GVGAWVLPGA ALSYGESVAD
WVTLAPPTCL TL
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