Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_2171 |
Symbol | |
ID | 4604421 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 2626304 |
End bp | 2626843 |
Gene Length | 540 bp |
Protein Length | 179 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639781556 |
Product | hypothetical protein |
Protein accession | YP_928046 |
Protein GI | 119775306 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.114551 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAAATC CTTCGGCAAC TTCTGCAGGC AATCCAATGC TTGCACAAAT GAAAGACATT CAGCTGCCGC CAGAGGTGTC AGCCTGGCCA CCCGCACCCT GGGTATGGCC CGCCCTGGCA ATTCTGCTTG GCATATTGGC ACTGGGATTC TGGCGCTGGC GTAAATACAG GGCAGAGAAA CAGGCATTGC TCAAACCCAG AGCCGAAGCC CTTGCTTTGC TAGCCCAGCT CTCACCCACA GAGCCGGGGT TTGCGCTCGC GCTCTCAGCG CTGCTCAAAC GCGTGGCCAT GCGCTATTAC CCAAGGGAGC AAATCGCTTC ACTAACGGGG CATGCCTGGG CCGAGTTTCT CGCCACGCAG CACCCCACAC CACAAGGGTC AGATGTATTT CAGCAGATGG CTCAAGCCGC GTATCGGCAA GCCCCCCTCG CTGCTGTTGA TGCCGAGGCC ATGAAACAGC AGGCACAATT GTGGATAGCC TCCCTACCCC ACAAGTCATC GGCAGCTGAC ACCATCTCCG GGGAACTCAA GGCATGTTGA
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Protein sequence | MINPSATSAG NPMLAQMKDI QLPPEVSAWP PAPWVWPALA ILLGILALGF WRWRKYRAEK QALLKPRAEA LALLAQLSPT EPGFALALSA LLKRVAMRYY PREQIASLTG HAWAEFLATQ HPTPQGSDVF QQMAQAAYRQ APLAAVDAEA MKQQAQLWIA SLPHKSSAAD TISGELKAC
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